Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0702 |
Symbol | |
ID | 5711137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 708819 |
End bp | 709466 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641266611 |
Product | WbqC-like family protein |
Protein accession | YP_001532049 |
Protein GI | 159043255 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGCTGG CGGTGATGCA GCCCTATCTC TACCCCTACC CGCTTTATTT TCACCTGATC GCCTCGGTGG ACCGCTTCGT GGTGTTCGAC TGCGTGCAGT TCCCCCGCCG CGGCCGGGTC CACCGCGCGC CCCTGCCCGG TGCTGGCTGG CTGACCCTGC CGCTTGCGCC CCAGCCCCGG GACACGACGA TCCAGGCGCT GCGCTTCGCG GATGCAGCAC AGCGGCTCTG GTCCGACCGG CTCGCCGCCC TGCCCTGGCT CGGCCCGGAG CTTACCGCCC GGCTCGCCCC CCTCGGCGCG GATGTCACCG GCTACCTGGT CGACCAGCTG CGCGGGGTTT GCGCGCGGCT CGGGATCACG ACGCCGCTCC TGCGCAGCTC GGCGCTTGAC CTGCCCCGGG CCGCGCGCGG CACGGACCGG GTGATCGCCG CCGCCCGGGC CTTGGGGGCG GATCACTACG TGAACCTGCC CGGCGGGCGC CCACTCTATG ATCCCGCCAC CTTCGCCGCC GCGGGGCTGG AGCTGTCGTT TCTCGCCCCC TATGCCGGCC CGCACGCCTC CCTGCTTCAT GCCCTCGCGA CGCAGCCCGT CGCCACCCTG CAGGACGAGC TGGCCCGCCT GCCCGCCCCG GAAAGGGCCC TGCCGTGA
|
Protein sequence | MRLAVMQPYL YPYPLYFHLI ASVDRFVVFD CVQFPRRGRV HRAPLPGAGW LTLPLAPQPR DTTIQALRFA DAAQRLWSDR LAALPWLGPE LTARLAPLGA DVTGYLVDQL RGVCARLGIT TPLLRSSALD LPRAARGTDR VIAAARALGA DHYVNLPGGR PLYDPATFAA AGLELSFLAP YAGPHASLLH ALATQPVATL QDELARLPAP ERALP
|
| |