| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0700 |
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| Symbol | |
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| ID | 5711135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 706599 |
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| End bp | 708116 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641266609 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001532047 |
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| Protein GI | 159043253 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.232219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTTG CGCTTTGGCT TCAGAGGACT GCGGCGCGCT GCCCGGATGC GCCGGCGCTT
TACACCGGCA CGCGGCTGGA GACGGATTAT GCCGGGTTCG CGGACCAGGC GGCCCGGATC
GGCGCGGCCC TGTCGGCGCG CGGTCTGGGC AAGGGCGACC GTATCGGCGT GTTCATGAAG
AACAGCACCG ATTACCTGCG CGTGCTCTAT GGCATCTGGT GGTGCGGGGC CGCCGCGATC
CCGATCAATT CCAAGCTGCA CCCGCGGGAG GCGGCCTGGA TCCTGTCCGA TGCGGAGGCT
GCGCTGTGCC TCGTGACCCC GGACCTGGCC GAGGGCTTGG CGGAGGCTGC GCCCGACTGC
GCCTGCGTGG TCACCGGCAG TGCGGCCTTT GGCGAAATGC TGGCCGCCCC GCCCATGGCG
GCACCGGTGG CACGGGCCAG CGGCGATCTG GCCTGGCTGT TCTATACCTC GGGTACGACC
GGCAAGCCCA AGGGCGTGAT GATGAGCTTT GCCACGCTGA CGGCCATGAC GCTGAGCTAT
TTCGTGGACG TGGACGAGGT GACGGCGCAG GACGCGATCC TCTATTCGGC GCCCATGAGC
CACGGGGCCG GGGTCTACAA CTTCATGCAT GTGCTGCGCG GCGCGCGCCA CGTGGTGCCC
GAGAGCGGCG GGTTCGACCC GGCGGAGATC TTCGATCTGG CCCGCGAGAT GCGCCAGGTG
AGCCTGTTCG CCGCGCCGAC GATGGTGCGG CGGATGATCG ATGTGGCCAA GGCGCGGGGC
GACACGGGCG ACGGCATCAA GACGATCGTC TATGCGGGCG GGCCGATGTA CCTGGCCGAT
ATCATCGAGG CGGTGGAGGT TCTGGGCGAC CGGTTCGTGC AGGTTTACGG GCAGGGGGAG
TACCCCATGA GCATCACCGC GCTCAGCCGC GCGGATGTCT CGGACCGCAG CCATCCGGAT
TGGCAGGCAA GGCTGGCCTC GGTCGGGGTG GCGCAGACGA TCAGCGATGT CGCGATCCTC
GATGCCGAGG GCCGGCCGGT ACCCCCGGGC GAGACCGGCG AGATCGCGGT GCGCGGCGCG
GGGCTGATGC TGGGCTACTG GAACCGGCCG GAGGCGACGG CGGAGACGAT CAGGGACGGC
TGGCTCTGGA CCGGCGACAT GGGCCGGATG GACGCGGACG GGTATGTCAC CATGGTGGAC
CGGTCCAAGG ACATGATCAT CTCGGGGGGC TCGAACGTCT ATCCGCGCGA GGTGGAAGAG
GTGCTCCTGA CCCATCCGCA GGTGGCGGAG GTGTCGGTGG TGGGTCGGCC CCACGCGGAA
TGGGGCGAGG AGGTGGTGGC CTTCGTGGTC CCGGCCCCGG GGGCGGAGAT GGATCCGGGG
GTGCTGGATG CCCATTGCCT GTCGCAGATC GCCCGGTTCA AGCGGCCCAA GGCCTATATC
GCGCTGCCCG AATTGCCGAA GAACAATTAC GGCAAGGTGC TGAAGATCGA GCTGCGCGCG
CGGTTGACGA AAGGCTGA
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| Protein sequence | MNFALWLQRT AARCPDAPAL YTGTRLETDY AGFADQAARI GAALSARGLG KGDRIGVFMK
NSTDYLRVLY GIWWCGAAAI PINSKLHPRE AAWILSDAEA ALCLVTPDLA EGLAEAAPDC
ACVVTGSAAF GEMLAAPPMA APVARASGDL AWLFYTSGTT GKPKGVMMSF ATLTAMTLSY
FVDVDEVTAQ DAILYSAPMS HGAGVYNFMH VLRGARHVVP ESGGFDPAEI FDLAREMRQV
SLFAAPTMVR RMIDVAKARG DTGDGIKTIV YAGGPMYLAD IIEAVEVLGD RFVQVYGQGE
YPMSITALSR ADVSDRSHPD WQARLASVGV AQTISDVAIL DAEGRPVPPG ETGEIAVRGA
GLMLGYWNRP EATAETIRDG WLWTGDMGRM DADGYVTMVD RSKDMIISGG SNVYPREVEE
VLLTHPQVAE VSVVGRPHAE WGEEVVAFVV PAPGAEMDPG VLDAHCLSQI ARFKRPKAYI
ALPELPKNNY GKVLKIELRA RLTKG
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