| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0697 |
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| Symbol | dctP1 |
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| ID | 5711132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 703665 |
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| End bp | 704675 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641266606 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001532044 |
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| Protein GI | 159043250 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACT ACGTACTGAG CGGCGCGCTG GCCGCAGGCC TCGGCCTCGG CGGGGCGGCG
CAGGCGACCG AGACGCTGAC GGCGGTCCAC GCCTTCCCCA CGACCCTGAT CTATACCCAG
AGCTTCCTGG AGTTCGTGGA CAAGGTGAAT GCCGCGGGCG AGGGCGTGGT GCAGATCGAG
GTGCGCGGCG GGCCCGAGGC GATCGGCATG TTCCAGCAGC CCGACGCGGT GCGCGACGGG
ATCGTGGACA TGGTCTATAC GCCGGGCTCG TTCTACGGCG GCACGGTGCC CGAGAAGGAC
GCCATGGTGG CGTCCAACCT GACGGCGGTC GAGGCGCGCG AGAATGGTGG CACCGACCTG
ATGAACCAGA TCCACCAGGA GAAGATGGGG GTCTATTACC TCGGCTGGTT CGACAGCGGG
GTGTCCTACA ACCTGTGGAC CAAGGATGAG CCGCAATTCG AGGAGAACGG CGATCTGAGC
GTGGAGGGCA TCAAGCTGCG CGGCAACGCG GTCTACAACG CCTTCTTCAC CGAGTATCTG
GGCGCGCAGG TGATCGACCT GCCGACCACG GATGTCTATG CCGCGCTGGA GCGGGGCGTG
GTGGATGCCA CGGGCTGGAC CCAGATCGGG CTGATCGACC TGAAATGGAA CGAGTTCCTG
AACTACCGGA TCGAGCCGAA TTTCTTTTCC ACCGACCTCG GCGTGATCGT GAACCTGGAG
AAATGGGAGA GCCTGAGCGA CGAGGCGAAA ACCATCCTTC AGGATGTGGC GATCCAGCAT
GAGAGGGACA GTGTCGAGGC CCTGCGCGCC AAGCGGGACG CGGATTTCGC AGCGCTCGAA
GAGGGCGGCA TGCAGGTCGT CAGCCTGGAG GGCGAGGCCA AGGAGCGTTA CCTCGCGGCG
GCGCGGGAGA AGACCTGGGA GCGGATGCGC GGCCTGATGG CGGAGCATCC TTCGGGCGAC
GGCAATTACG ACACGCTGAT CTCTCTCTAC TACGATCCGG CGCTGGACTG A
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| Protein sequence | MKHYVLSGAL AAGLGLGGAA QATETLTAVH AFPTTLIYTQ SFLEFVDKVN AAGEGVVQIE
VRGGPEAIGM FQQPDAVRDG IVDMVYTPGS FYGGTVPEKD AMVASNLTAV EARENGGTDL
MNQIHQEKMG VYYLGWFDSG VSYNLWTKDE PQFEENGDLS VEGIKLRGNA VYNAFFTEYL
GAQVIDLPTT DVYAALERGV VDATGWTQIG LIDLKWNEFL NYRIEPNFFS TDLGVIVNLE
KWESLSDEAK TILQDVAIQH ERDSVEALRA KRDADFAALE EGGMQVVSLE GEAKERYLAA
AREKTWERMR GLMAEHPSGD GNYDTLISLY YDPALD
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