Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0650 |
Symbol | dnaX |
ID | 5711485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 651643 |
End bp | 653406 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641266558 |
Product | DNA polymerase III subunits gamma and tau |
Protein accession | YP_001531997 |
Protein GI | 159043203 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0107119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA CCACCACCAC CGGTTACCAG GTGCTGGCGC GGAAATACCG CCCGGCGACC TTTGCGGACC TGATCGGCCA GGACGCCATG GTCCGCACCC TGCGCAACGC GTTTCAAGCC GACCGGATCG CCCAGGCCTT CATGATGACC GGCATCCGCG GCACCGGGAA GACCACCACC GCCCGGATCA TCGCCAAGGG CATGAACTGC ACCGGCGCCG ATGGCGCGGG CGGGCCGACC ACGGACCCTT GCGGGCAATG CGACAATTGC CGCGGGATCA TGGCGGGCCA GCATGTGGAC GTGATCGAGA TGGACGGCGC CAGCCAGACC AAGATCGACG ACATCCGCGC CAATGTGCTC GACTCGGTCT ATTACGCGCC GGCCTCCGCG CGCTACAAGA TCTTCATCAT CGACGAGGTG CACATGCTCT CGACCAGCGC GTTCAACGCG CTGCTCAAGA CCCTCGAAGA GCCCCCCGCC CATGTGAAAT TCATCTTCGC CACCACCGAG ATCCGCAAGG TGCCCGTCAC CGTGCTCAGC CGCTGCCAGC GGTTCGATTT GCGCCGGATC GAGCCGGAGG TGATGATCGC CCATCTGCGC CGCATCGCCG GGCTGGAGCG CGCCGAGATC ACCGATGACG CGCTGGCACT GATCACGCGG GCCGCCGAGG GGTCGGTGCG CGATGCCATG AGCCTGCTGG ATCAGGCGAT CAGCCACGGC GCGGGCGAGA CCACCGCCGA GCAGGTGCGC GCCATGCTGG GCCTGGCGGA CCGGGGCCGG GTGATGGACC TGTTCGACCT GGTGATGCGC GGCGACGCGG CGGGGGCGCT GACCGAACTG TCGGCGCAGT ATTCCGACGG GGCCGATCCC ATGGCGGTGC TGCGCGATCT CGCCGAGGTG ACGCACTGGG TCTCGGTGAT CAAGATCACC CCCGATGCCG CCGAGGATCC CACCGTCAGC CCCGATGAAC GTGCCCGCGG GCAGGCGGCG GCGGCGGAGT TGCCCATGCG CGCACTGACC CGGATGTGGC AGATGCTGCT CAAGGCGCTG GAGGAGGTCG CGATCAGCCC CAACGCCATG ATGGCCGCCG AGATGGCGAT CATCCGGCTG ACCCATGTGG CCGACCTGCC CTCCCCCGAA GATCTGGTGC GCAAGCTGCA GACCATGACG CCCCCACCCG CCACGCCCGG CGGCGGCGCG GCCCCCGGCG GCCCCGGCAC GGGCGTCAGC GCGCGCGGAC ATGGCGCGGC CCCCGCCCCG CGCGGCGGCG GTGTGCGCGC CTCCGCCGGT CCTGCACTGG CCATGGCCCA GGCCGATCCC GACGCGCTGG CGCGGTTCCG GCGGTTCGAC GATGTGGTCG CCCTGATCCG CAGCCACCGG GACGTGAAGC TCCTGGTCGA GGTTGAAGGC TGCCTGCGTC TGGCCGCCTA CAGCCCCGGC CGGATCGAGT TCGCGCCGAC CGAGAACGCG CCGCGCGACC TCGCCGCCCG CCTCGCCGCC CGCCTTCAAA GCTGGACCGG CGCCCGCTGG GCGGTCTCCG TGGTGGCCGA GGCCGACGCC CCCACCATCG CCGAGACCCG CGACGCCGAA AAACTGGAGA TGGAGCGCAA CGCGCTGGAC CACCCGCTCG TGGCCGCCGT CTTCGCCGCC TTCCCCAAGG CAAGGATCAC CGAAATCCGC ACCCGCGAGG CCCTGACCCA GGAGGCCGCC ATCGAGGCGC TTCCGGAAGT CGAGGATGAA TGGGACCCGT TCGAAGACGA CTAA
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Protein sequence | MSDTTTTGYQ VLARKYRPAT FADLIGQDAM VRTLRNAFQA DRIAQAFMMT GIRGTGKTTT ARIIAKGMNC TGADGAGGPT TDPCGQCDNC RGIMAGQHVD VIEMDGASQT KIDDIRANVL DSVYYAPASA RYKIFIIDEV HMLSTSAFNA LLKTLEEPPA HVKFIFATTE IRKVPVTVLS RCQRFDLRRI EPEVMIAHLR RIAGLERAEI TDDALALITR AAEGSVRDAM SLLDQAISHG AGETTAEQVR AMLGLADRGR VMDLFDLVMR GDAAGALTEL SAQYSDGADP MAVLRDLAEV THWVSVIKIT PDAAEDPTVS PDERARGQAA AAELPMRALT RMWQMLLKAL EEVAISPNAM MAAEMAIIRL THVADLPSPE DLVRKLQTMT PPPATPGGGA APGGPGTGVS ARGHGAAPAP RGGGVRASAG PALAMAQADP DALARFRRFD DVVALIRSHR DVKLLVEVEG CLRLAAYSPG RIEFAPTENA PRDLAARLAA RLQSWTGARW AVSVVAEADA PTIAETRDAE KLEMERNALD HPLVAAVFAA FPKARITEIR TREALTQEAA IEALPEVEDE WDPFEDD
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