Gene Dshi_0649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0649 
Symbol 
ID5711484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp651279 
End bp651623 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content63% 
IMG OID641266557 
Productconserved hypothetical protein DUF149 
Protein accessionYP_001531996 
Protein GI159043202 
COG category[S] Function unknown 
COG ID[COG0718] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00103] DNA-binding protein, YbaB/EbfC family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0145182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGG GATTGGGAAA TCTGGGCGAC ATGGCCAAGG TCATGAAGCA GGCCCAGGAA 
ATGCAGGCCA AGATGGCCGA AATGCAGGAA AACCTGAAAA CCATCACCGT GACCGGCGAG
AGCGGCGCGG GACTGGTCAA GGCCACCGCC ACCGCCAAGG GCGAGCTCAC GGGGCTGGAC
ATCGACCCGT CGATCTTCAA CCCCGAGGAA AAGGAAGTCG CCGAGGACCT GATCCTCGCC
GCGATCAAGG ACGCCCAGGC CAAGGCGCTC GACAAGGGGC GCGAAGAGAT GGCCAAGGTC
ACCGAGGGGC TGAACCTGCC CGAGGGCATG AAGCTGCCCT TCTGA
 
Protein sequence
MLKGLGNLGD MAKVMKQAQE MQAKMAEMQE NLKTITVTGE SGAGLVKATA TAKGELTGLD 
IDPSIFNPEE KEVAEDLILA AIKDAQAKAL DKGREEMAKV TEGLNLPEGM KLPF