| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0644 |
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| Symbol | uvrC |
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| ID | 5711479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 642411 |
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| End bp | 644306 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641266552 |
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| Product | excinuclease ABC subunit C |
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| Protein accession | YP_001531991 |
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| Protein GI | 159043197 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA ATGGCGAACT GTCGGACGGA TTGGACCCCG AAGCGGAGGC GCTGACCGGT
CATGCGCGCA TCCAGGCCTA TCTGAAAACC CTCGACGGCT CGCCCGGGGT GTACCGGATG
CTCGATGCGC AATCCCGGGT GCTCTACGTG GGCAAGGCGC GCAACCTCAA GGCGCGGGTG
TCGAACTACG CGCGCCCCTC GGGGCACTCG GCGCGGATCG CGCGGATGAT CTCCGAGACC
GCGTCGATGA TGTTCCTGAC CACGCGGACC GAGACCGAGG CGCTGCTGCT GGAGCAGAAC
CTCATCAAGC AGCTCAAGCC GCGCTACAAC GTGCTGTTGC GCGACGACAA GAGCTTTCCG
AACATCCTCG TGGCCAAGGA CCACGCCTAT CCGCAGATCC GCAAGCATCG CGGGCGCAAG
GCCACCAAGG GCGCCTATTA CGGCCCCTTC GCCAGTGCGG GGGCGGTGAA CCGGACGCTC
AACCAGCTGC AGAAGGCCTT CCTGCTGCGC AACTGCTCGG ACGCGATGTT CGAAAGCCGC
ACGCGCCCCT GCCTGCTCTA CCAGATCAAG CGCTGCTCGG GCCCGTGCGT CGGCTATATC
TCCGAAGAGG ATTACGACGC CTCCGTGCGC GATGCCGAAC GGTTCCTGTC GGGCAAGTCC
ACCGAGGTGC AGGAACGCCT CGCCGTCCAG ATGACCGAGG CTGCCGAGGC GATGGAGTTC
GAGCGCGCCG CCGCCCTGCG CGACCGCATC CGCGCCATGA CCCAGGTGCA GTCGGCCCAG
GGCATCAACC CGCGCGGCGT GTCCGAGGCG GATGTGATCG CGCTCCACCT CGAGAACGGG
CAGGCCTGCG TGCAGGTGTT CTTCATCCGA GCAAACCAGA ACTGGGGCAA CCGCGACTTC
TATCCGCGCA CCGGGGCGGG GGCCGAGGCG CCCGAAATCC TCGAAGCCTT CCTCGGGCAG
TTCTACGACC AGAAGGACCC GCCCCGGCAG ATCCTGCTGT CCCATCCGAT CGACAACCAT
GACCTCATGG CCGACGCGCT GGGCGAAAAG AGGGGCCGCA AGGTCGAGAT CCTCGTGCCC
AAGCGCGGCG AAAAGGCCGA GTTGATCGCC GGGGCAGAGC GCAACGCCCG CGAGAGCCTC
GCCCGCCGCA TGGCCGAAAG CGCCACGCAG ACCAAGCTGC TGCGCGGTCT GGCCGAGGCC
TTCGATCTGG ACGCGCCGCC AAAGCGGATC GAGGTCTACG ACAACTCCCA TATCCAGGGC
ACGGACGCGG TCGGCGCGAT GATCGTGTCG GGCCCGGACG GGTTCCTGAA ATCCCAGTAC
CGCAAGTTCA ACATTCGCGG CACCGACCTG ACCCCGGGCG ACGATTTCGG CATGATGAAA
GAGGTGTTGC AACGCCGCTT CCAGCGCCTG CTGAAAGAAG ACCCCGACCG CGAGAGCGAG
GCTTGGCCGG ACCTGTTGCT GATCGACGGC GGGGCGGGGC AGGTCTCGGC GGTGGCGGAC
ATCCTCGGCG ATCTCGGGGT GGAGGACGTG CCCTTCATCG GCGTGGCCAA GGGCGTGGAC
CGCGACGCGG GCAAGGAGGA ATTCCACCGC CCCGGTGCGC GCCCCACGGC TCTCCGCCAC
AACGACCCGG TGCTTTATTT CGTCCAGCGC CTGCGCGACG AGGCGCACCG TTTCGCCATC
GGCACGCACC GGGCGAAGCG GTCGAAATCG GTCTCCCGCA CGCCGCTCGA CGATGTGCCG
GGGGTGGGTG CCAAGCGCAA GCGCGCATTG CTGGCGCATT TCGGCTCCGC CAAGGCGGTC
AGCCGCGCCA ATCTGTCGGA CCTCAAGGCG GTCGAGGGCG TCTCGGCGAC CATGGCGCAG
ACCATCTACG ACTTCTTTCA CGACCAGAAG GGCTGA
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| Protein sequence | MSDNGELSDG LDPEAEALTG HARIQAYLKT LDGSPGVYRM LDAQSRVLYV GKARNLKARV
SNYARPSGHS ARIARMISET ASMMFLTTRT ETEALLLEQN LIKQLKPRYN VLLRDDKSFP
NILVAKDHAY PQIRKHRGRK ATKGAYYGPF ASAGAVNRTL NQLQKAFLLR NCSDAMFESR
TRPCLLYQIK RCSGPCVGYI SEEDYDASVR DAERFLSGKS TEVQERLAVQ MTEAAEAMEF
ERAAALRDRI RAMTQVQSAQ GINPRGVSEA DVIALHLENG QACVQVFFIR ANQNWGNRDF
YPRTGAGAEA PEILEAFLGQ FYDQKDPPRQ ILLSHPIDNH DLMADALGEK RGRKVEILVP
KRGEKAELIA GAERNARESL ARRMAESATQ TKLLRGLAEA FDLDAPPKRI EVYDNSHIQG
TDAVGAMIVS GPDGFLKSQY RKFNIRGTDL TPGDDFGMMK EVLQRRFQRL LKEDPDRESE
AWPDLLLIDG GAGQVSAVAD ILGDLGVEDV PFIGVAKGVD RDAGKEEFHR PGARPTALRH
NDPVLYFVQR LRDEAHRFAI GTHRAKRSKS VSRTPLDDVP GVGAKRKRAL LAHFGSAKAV
SRANLSDLKA VEGVSATMAQ TIYDFFHDQK G
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