| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0643 |
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| Symbol | |
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| ID | 5711478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 641326 |
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| End bp | 642117 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641266551 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001531990 |
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| Protein GI | 159043196 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGG CGATGGCAGG GGCGGCCCTG GTGACCGGCG CGGGCAAACG GCTCGGCGCG
GCGATGGCAC TCTTTCTGGC GGAGCGGGGG CACGACGTGG CCGTGCATTA TGCCAGCTCC
GGCGACGCCG CCGAGGACGT GGCCGCGCAG ATCCGCGCCA TGGGCCGCAA GGCGGTGACC
GTGCAGGCCG ACCTGCTGGT CGAGACCGAG ACCGCCACGC TGGTGCCCCG CGCGGCCGAG
GCGCTGGGCC CCCTGAGCGT ACTGGTCAAC AACGCCTCGA TCTTCGAATA TGACAGCCTG
GAGAGTGCCA CGCGCGACAG CTGGGACCGC CATTTCGAAA GCAATCTGCG CGCGCCCTTC
GTGCTGATCC AGGCGTTTGC CGCCCAGGCC CCCGAGACCG GGCGCGACGG CAATGACGAG
CCCCTGGCGC GCGCGCTGGT GGTCAACCTG ATCGACCAGC GGGTGCGCAA GCTGACGCCG
GAGTTCATGA CCTACACCCT GGCCAAGATG GGGCTCTGGG CCTTCACGCA GACCGCGGCA
CAGGCCCTCG CCCCGCGCAT CCGCGTCAAT GCCATCGGGC CGGGGCCGAC CCTGCGCGGC
GGGCGGCAGT CGGTGGAACA TTTCGCCAAG CAGCGCGCCG CGACGATCCT CGGGCGCGGG
GCCGACCCCG CCGGCATCAC CGCCGCGCTG GGCTACTTTC TGGATGCACC TGCCGTGACC
GGGCAGCTTT TGTGTGTGGA TGGCGGCCAG CACCTGTCCT GGGAGACGCC GGACGTGATC
GGAGTGGAAT AA
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| Protein sequence | MTQAMAGAAL VTGAGKRLGA AMALFLAERG HDVAVHYASS GDAAEDVAAQ IRAMGRKAVT
VQADLLVETE TATLVPRAAE ALGPLSVLVN NASIFEYDSL ESATRDSWDR HFESNLRAPF
VLIQAFAAQA PETGRDGNDE PLARALVVNL IDQRVRKLTP EFMTYTLAKM GLWAFTQTAA
QALAPRIRVN AIGPGPTLRG GRQSVEHFAK QRAATILGRG ADPAGITAAL GYFLDAPAVT
GQLLCVDGGQ HLSWETPDVI GVE
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