| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0642 |
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| Symbol | |
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| ID | 5711477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 640377 |
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| End bp | 641315 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641266550 |
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| Product | Na+/Ca+ antiporter |
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| Protein accession | YP_001531989 |
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| Protein GI | 159043195 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0530] Ca2+/Na+ antiporter |
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| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein
[TIGR00378] calcium/proton exchanger (cax) |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTCC TCCTTGCGGG GCTCGGCCTC GTCATTCTTG TTCTGGCTGG CGACAGTCTG
GTCAAAGGTG CGGTCAATCT CAGCCTGCGT GTCGGGATCC CGGCGCTGAT CGTGTCGCTG
ACCATCGTCG CCTTCGGCAC CTCCGCGCCG GAGCTTCTGA TCTCCATCGC GGCGGTGAAG
GATGGCGCAC CGGGGCTGGC GCTGGGCAAT GTGGTCGGCT CGAACACCGC CAATATCCTG
TTGGTGCTGG GGATACCGGC CCTGCTGGCG GGGCTGCACA CCGCCGATTG CGACACCAGG
CGCAGCTACG TGCAGATGCT GGCGGCGACG ATCCTGTTCA TCGCGGTGTG TTTCCTGGGC
CCGATCACCT GGATGCACGG GCTGGTGCTG CTGGCCGCGC TGGGCTGGAT GCTATTCGAC
GCGTTCCGCG AGGCCAAGGC CCACAAGAAC GCCCTCCCCG AGGTCGAAGA GGTCGAGGGC
GCGGACCCCG ACATGCCCTG GTGGCGGATC GTCATGTTCC TGTTTCTGGG GCTCGTCGGC
CTGCCCCTGG GGGCGGACCT GCTGGTGGAT GCGTCGATCA ACATCGCGCG CGCGTTCGGC
ATCTCCGAAG AGGTGATCGG CCTGACCCTT GTGGCTTTCG GCACCTCCCT GCCGGAACTG
GCCACCACCG TCATGGCCTC GATCCGGCGG CAGGCCGATG TGGCGCTGGG CAACGTGATC
GGGTCGAACA TGTTCAACCT GCTGGCGATC ATCGGGATCA CTGCGATGGT GGGGGACATC
CCCGTCTCGG CCGAATTCCT GACCTTCGAT CTGTGGGTGA TGCTGGGGGC GTCGCTCCTG
CTGATCCCGT TCGTCTATTT CCGGGTGAAT TTGAAGCGAA CGGCCGGTGT TGTCTTGACG
GGGCTCTATG TCGCCTATGT GGTCGCGCTG CTGACGTGA
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| Protein sequence | MDFLLAGLGL VILVLAGDSL VKGAVNLSLR VGIPALIVSL TIVAFGTSAP ELLISIAAVK
DGAPGLALGN VVGSNTANIL LVLGIPALLA GLHTADCDTR RSYVQMLAAT ILFIAVCFLG
PITWMHGLVL LAALGWMLFD AFREAKAHKN ALPEVEEVEG ADPDMPWWRI VMFLFLGLVG
LPLGADLLVD ASINIARAFG ISEEVIGLTL VAFGTSLPEL ATTVMASIRR QADVALGNVI
GSNMFNLLAI IGITAMVGDI PVSAEFLTFD LWVMLGASLL LIPFVYFRVN LKRTAGVVLT
GLYVAYVVAL LT
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