Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0640 |
Symbol | |
ID | 5712099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 639402 |
End bp | 640199 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641266548 |
Product | peptidase S49 |
Protein accession | YP_001531987 |
Protein GI | 159043193 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCT GGCTCCCCTT CGTGAAATCG GACCCGACCG TCGCCGTGGT GCGCCTGCAA GGCGCGATCG CGGCCACAGG CCGTGGCATG TTGAATGATC AGTCCGTGGG GCCGCTGCTG GAACGCGCGT TCACCAAGGG CAAACCGGAC GCGGTGGCGC TGGTGATCAA CTCCCCCGGC GGCTCGCCCG CCCAAAGCTC GCTGATCGGC GCGCGCATCC GGCGGCTGGC TGAGGAAAAA GAGGTGCCTG TCTACGCCTT CGTCGAAGAT GTGGCGGCCT CGGGCGGCTA CTGGATCGCG GCCGCGGCGG ACGAGATCTG GCTCGACGCG ACCTCCATCG TCGGCTCGAT CGGGGTGATC TCGGCCTCTT TCGGCTTCCA CGAGTTGATG GAACGGCAGG GGATCGAACG GCGCGTCTAT ACCGCGGGCA AGGACAAGTC CCTGCTGGAC CCGTTCCGCC CGGAACGCCC CGAGGATGTC GAGCGGCTCA AGGGTCTGCA GGCCCAGCTG CACGAGACCT TCAAGGGCCA TATCACCGCC CGGCGCGGCG CGAAGCTGCC CGAGGATCGC GACCTCTATA CCGGCGAGGT CTGGATCGGC CAGCAGGGCA TCGATGTGGG TCTCGCCGAC GGGATCGGCC ACGTGGCCCC GGTGATGAAA GAGAAATTCG GCGACAAGAC CCGGTTCCGG ACCTATGGCC CGCGCCGCCC GCTGATCAGC CGCTTTGGCT TCTCGGTGGT GGACGACACG CTGCATGCCC TGGAGGCGCG CGGTCTCTGG GCACGCTACG GGCTGTGA
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Protein sequence | MKRWLPFVKS DPTVAVVRLQ GAIAATGRGM LNDQSVGPLL ERAFTKGKPD AVALVINSPG GSPAQSSLIG ARIRRLAEEK EVPVYAFVED VAASGGYWIA AAADEIWLDA TSIVGSIGVI SASFGFHELM ERQGIERRVY TAGKDKSLLD PFRPERPEDV ERLKGLQAQL HETFKGHITA RRGAKLPEDR DLYTGEVWIG QQGIDVGLAD GIGHVAPVMK EKFGDKTRFR TYGPRRPLIS RFGFSVVDDT LHALEARGLW ARYGL
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