Gene Dshi_0624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0624 
SymbolyedZ 
ID5712078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand+ 
Start bp616088 
End bp616696 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content66% 
IMG OID641266527 
Productputative sulfite oxidase subunit YedZ 
Protein accessionYP_001531971 
Protein GI159043177 
COG category[S] Function unknown 
COG ID[COG2717] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.85566 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGACG GGCTCAACCG CGCGGCGCGC AAGGTGCCGA ACTGGCTGTT CTACGTTCTG 
GGGCCGCTGC CCGCGATGTG GCTGCTGTGG CAGGGGATCC AGGGCGGGCT CGGGGTCGAC 
CCGGTCAAGG TGATCGAGCA CGAGCTGGGT CTGATCGCCT TGCAACTGCT GATCGCGGGG 
CTTGCGATCA CGCCCTTGCG GCGCTTCGCG GGGCTCAACC TGATCAAGTG GCGCCGTCCC 
ATCGGCGTTC TGGCGTTTTC CTACGTCGCC CTGCATCTGG CGACCTGGGT GCTGCTCGAC 
ATGCAGCTTT ACTGGGAACA GATGCTCAAG GATATCGCCA AGCGCCCGTA TATCACCATC 
GGCATGGTGG CCTTTGTCCT GCTCGTCCCC CTGGCCTGGA CATCGAACAA TCGGTCCGTG 
CGGAGCATGG GGGCCGCCGC CTGGAGCAAG CTGCACCGGC TTGTCTATCC GGCGGTCCTG 
CTGGGGGCGG TGCATTTCGT CATGGTTCAG AAAGTCTGGG AGGCGGAGTC GCTGCTCTAC 
CTCGCGCTGA CGGTCGGATT GCTCGCCACG CGGATCAAGC TGCCGCGCAG GGACACCGCG 
CGCGCCTGA
 
Protein sequence
MVDGLNRAAR KVPNWLFYVL GPLPAMWLLW QGIQGGLGVD PVKVIEHELG LIALQLLIAG 
LAITPLRRFA GLNLIKWRRP IGVLAFSYVA LHLATWVLLD MQLYWEQMLK DIAKRPYITI 
GMVAFVLLVP LAWTSNNRSV RSMGAAAWSK LHRLVYPAVL LGAVHFVMVQ KVWEAESLLY 
LALTVGLLAT RIKLPRRDTA RA