| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0623 |
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| Symbol | yedY |
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| ID | 5712077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 615171 |
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| End bp | 616088 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641266526 |
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| Product | putative sulfite oxidase subunit YedY |
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| Protein accession | YP_001531970 |
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| Protein GI | 159043176 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2041] Sulfite oxidase and related enzymes |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.689313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACGCA CAACCGATCT GAACACGGGC CTGACACATG CGGACATCAC GCCCAGATCC
GTTTTCCTCA ATCGCCGGAG CTTCATGGCA AGCGCCGCGG CTGCGGGGAT CTTCGCCGGC
AGCCAGGCCA CCGCGCGCGA TTTCGCGGGC GGCGAGACGC CCAACACGCT GGAAGAGATC
ACCAGCTACA ACAATTTCTA CGAGTTCGGC TTCGACAAGG GCGATCCGGC GAAATACGCC
CATGCGCTGA CCACCGATCC CTGGTCGATC ACGGTGGACG GTTTGGTCGA CAACCCCGGA
ACCTATGACA TCGCCGACTT GGTGGATGCG GCAGAGATCG AAGAACGCAT CTACCGCTTC
CGCTGTGTCG AGGCCTGGTC GATGGTCATT CCCTGGAACG GGATCGAGTT GAACAAGGTG
CTGGCCAAAC TCGGTGTGCA GCCCGGCGCG AAATACGTGG CCTTCGAGAC GCTCGTGCGC
CCGTCCGAGA TGCCGGCGCA GCGGGGCGGG GGCAATATCG AATGGCCGTA TCGCGAAGGT
CTGCGCCTGG ACGAGGCGAT GCATCCGCTG ACCCTGTTGG CGACGGGCAT TTACGGCGCG
CCCATGCCGA AACAGAACGG GGCCCCGATC CGGCTGGTGG TGCCGTGGAA ATACGGGTTC
AAGTCGATCA AGTCGATCGT GCGGATCTCG CTTGTGGACC AGGAGCCGCC GACCACCTGG
AACATGCTGC AGCCGCGCGA GTACGGTTTC TATTCCAACG TGAATCCCGA GGTCGACCAC
CCCCGCTGGT CCCAGGCCAC GGAGCGGCGC ATCGGCGACG GGCTATTCGC ACGCCGCCGC
GAGACCTTGA TGTTCAATGG CTATGCCGAC CAGGTCGCAA GCCTTTATGA CGGCATGGAC
CTGACCGAGT TCTACTGA
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| Protein sequence | MRRTTDLNTG LTHADITPRS VFLNRRSFMA SAAAAGIFAG SQATARDFAG GETPNTLEEI
TSYNNFYEFG FDKGDPAKYA HALTTDPWSI TVDGLVDNPG TYDIADLVDA AEIEERIYRF
RCVEAWSMVI PWNGIELNKV LAKLGVQPGA KYVAFETLVR PSEMPAQRGG GNIEWPYREG
LRLDEAMHPL TLLATGIYGA PMPKQNGAPI RLVVPWKYGF KSIKSIVRIS LVDQEPPTTW
NMLQPREYGF YSNVNPEVDH PRWSQATERR IGDGLFARRR ETLMFNGYAD QVASLYDGMD
LTEFY
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