| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0607 |
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| Symbol | dctP5 |
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| ID | 5712061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 599763 |
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| End bp | 600845 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641266510 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001531954 |
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| Protein GI | 159043160 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.866976 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGA AACACACACT CGCGGCCGTC TGTGCGGCAA CGTGCCTGAC CACTGCACCA
GCGTTTGCGG ACGGGCATGG CAACATCCAG GAAATGAAAC TCGAAGTGGT GGGCACCTGG
GGCTTCCTTG AGAACTGGAA GGTGTTCGAA GAACGCTTCT GGACCGAAGT GATCCCCGAG
GCCTCCGGCG GCAAGATCAC CGCGAACGCC AAACCCTATA CCGAGCTGGG CCTGAAGGGT
TACGAGGTCA TGGCCGGCGT TCGTAAGGGC GCCTATGATG TGGTGCATGC GCTGACCAGT
TATTCCAGCC AGGCCAGCCC TGCGCTGGAA GGCATCGACC TGTCGGGCAT CATTCAAGAC
TGGGACACGT ATCGCCAGGC GGTCGAGGCC TATCGCCCGA TCATTGAGCG CGAAGTGCGC
GAGAAATACA ACGCGCAGAT CGTCAACATC TATCCGTTTC CGACCCAGCA GCTCTGGTGC
AATCTCGGCG ACCGGTCGAT CACCAATGTC TCTCTGGCCG ACCTCGCGGG AAAAAAGATC
CGCACCTACA GCCGGACTCA GGGCGACTTC GTAGAAGGCC TGGGCGCCTC GTCGATCACG
CTGGCACTGG CGGAGGTGGT GCCAGCACTG GAGAAGGGCG TCGCCGACTG TGGCGTGACT
GGCACGATGC CTGCCTATAA CGGCAAGTGG TCGCAAGTGG TTACGCACAA CGTACGCGTT
CGCCTTGGCT TTGCCGCGAC CTTCACGGCG ATCAATCTCG ACACCTGGGA GAGCATGAAC
GCGGACACCC AGAACCTCAT TCTCACCGAG GCTAAAAAAT TCGAGGACGA GATTTGGGAG
TTCGAGCAGA CACTTGACCA GGCGGGTATG GACTGCAACG CACAAGGCCC CTGCGATCGC
GGTCAGCCCG GCAACATGAC ACCGATCGAG CCTGATGCCG AAGATCAGGC TCTTCTGAAG
AAGATCGCGG CTGAAACGGT TGTCCCCCGA TGGGCCGAAC GGTGCGGAAG CGCGTGCGCA
GCTGAGTGGA ACGCCACAGT CGGCAAGCTG ATCGGCATCA CCGCACCCAC AGACGGCTCG
TAA
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| Protein sequence | MKLKHTLAAV CAATCLTTAP AFADGHGNIQ EMKLEVVGTW GFLENWKVFE ERFWTEVIPE
ASGGKITANA KPYTELGLKG YEVMAGVRKG AYDVVHALTS YSSQASPALE GIDLSGIIQD
WDTYRQAVEA YRPIIEREVR EKYNAQIVNI YPFPTQQLWC NLGDRSITNV SLADLAGKKI
RTYSRTQGDF VEGLGASSIT LALAEVVPAL EKGVADCGVT GTMPAYNGKW SQVVTHNVRV
RLGFAATFTA INLDTWESMN ADTQNLILTE AKKFEDEIWE FEQTLDQAGM DCNAQGPCDR
GQPGNMTPIE PDAEDQALLK KIAAETVVPR WAERCGSACA AEWNATVGKL IGITAPTDGS
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