Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0606 |
Symbol | |
ID | 5712060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 599132 |
End bp | 599698 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641266509 |
Product | hypothetical protein |
Protein accession | YP_001531953 |
Protein GI | 159043159 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGACC GTATTCAATC CGGACTGGAA GGCACCGCGC GAGGGGCAGC GATCATCGGC GGAGCCGCCA TGTGTGCCGC CGCTTTCATG GTCACGATGG ATGTGATTTC GCGCAAGGTC TTTGGTGTGA CAATGCGCGG CTCAGACGAG ATCACCGGCT ATATCTTCGC CGCCTCGACC ACTTGGGCCT ATGCCTATGC GATGCTGACA CGCTCTAACA TCCGGATAGA CGTGGCCTAT GTCGCGCTGA ACACGAAGGC ACGGGCCTTG CTCGATCTAC TCGCGCTCGG CCTTCTGACC CTTTACATCT TCCTGCTGGC CCGCAGCGCC TGGAGCGTGG TCGAGGAAAG CTGGACGTTC AATTACACAG CACAGACACC GCTTGCGACG CCGCTCTGGC TCCCGCAAAG CTTCTGGTTC GCCGGCCTCG CCTTCATGCT GCTGTGCTTA GCGTTTCTCA GTTTGCGATG CCTCTGGTGT CTGGCCAAAG CCGACTGGCA GGGCATCGGC GCCCTCGCGG GGGTGAAAAG CCTCGATCAG GAAATCGAAG AAGAGACCCA CGTCTAA
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Protein sequence | MLDRIQSGLE GTARGAAIIG GAAMCAAAFM VTMDVISRKV FGVTMRGSDE ITGYIFAAST TWAYAYAMLT RSNIRIDVAY VALNTKARAL LDLLALGLLT LYIFLLARSA WSVVEESWTF NYTAQTPLAT PLWLPQSFWF AGLAFMLLCL AFLSLRCLWC LAKADWQGIG ALAGVKSLDQ EIEEETHV
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