Gene Dshi_0606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0606 
Symbol 
ID5712060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp599132 
End bp599698 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content60% 
IMG OID641266509 
Producthypothetical protein 
Protein accessionYP_001531953 
Protein GI159043159 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACC GTATTCAATC CGGACTGGAA GGCACCGCGC GAGGGGCAGC GATCATCGGC 
GGAGCCGCCA TGTGTGCCGC CGCTTTCATG GTCACGATGG ATGTGATTTC GCGCAAGGTC
TTTGGTGTGA CAATGCGCGG CTCAGACGAG ATCACCGGCT ATATCTTCGC CGCCTCGACC
ACTTGGGCCT ATGCCTATGC GATGCTGACA CGCTCTAACA TCCGGATAGA CGTGGCCTAT
GTCGCGCTGA ACACGAAGGC ACGGGCCTTG CTCGATCTAC TCGCGCTCGG CCTTCTGACC
CTTTACATCT TCCTGCTGGC CCGCAGCGCC TGGAGCGTGG TCGAGGAAAG CTGGACGTTC
AATTACACAG CACAGACACC GCTTGCGACG CCGCTCTGGC TCCCGCAAAG CTTCTGGTTC
GCCGGCCTCG CCTTCATGCT GCTGTGCTTA GCGTTTCTCA GTTTGCGATG CCTCTGGTGT
CTGGCCAAAG CCGACTGGCA GGGCATCGGC GCCCTCGCGG GGGTGAAAAG CCTCGATCAG
GAAATCGAAG AAGAGACCCA CGTCTAA
 
Protein sequence
MLDRIQSGLE GTARGAAIIG GAAMCAAAFM VTMDVISRKV FGVTMRGSDE ITGYIFAAST 
TWAYAYAMLT RSNIRIDVAY VALNTKARAL LDLLALGLLT LYIFLLARSA WSVVEESWTF
NYTAQTPLAT PLWLPQSFWF AGLAFMLLCL AFLSLRCLWC LAKADWQGIG ALAGVKSLDQ
EIEEETHV