Gene Dshi_0602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0602 
Symbol 
ID5712056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp595527 
End bp595928 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content66% 
IMG OID641266505 
Productprotein of unknown function DUF1025 
Protein accessionYP_001531949 
Protein GI159043155 
COG category[S] Function unknown 
COG ID[COG3824] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.911931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCGT CCCAGCTTTC TCCCGGTCTT GAGGCCTTCC TCACCATGGC GCGCGCGACC 
GTGGCCGAGT TTCCCGCGCC CTTCGCAGCC CTGGCGGCGG AGGTGGCCAT CGTCGTCGAG
GACTGGCCGC AGGACTGGAT GCTGGACGAT CTCGGCATCG ACGATCCGCT GGACCTGACG
GGGCTCTATG AGGGCATTCC GCTCACCGAG AAGTCGAGTT TCGATCAGCC GATGCAGCCC
GACACGGTCT GGCTCTTTCG CGAGCCGATC CTCGCCGAAT GGCGGGAGCG GGACGGGGTC
AGCCTGCGCG ACCTCGTGGC CCATGTCACT GTGCACGAGT TCGCCCATCA TTTCGGCTGG
TCCGACGACG ACATCGCCGC CATCGACCGC TGGTGGGAGT AG
 
Protein sequence
MSASQLSPGL EAFLTMARAT VAEFPAPFAA LAAEVAIVVE DWPQDWMLDD LGIDDPLDLT 
GLYEGIPLTE KSSFDQPMQP DTVWLFREPI LAEWRERDGV SLRDLVAHVT VHEFAHHFGW
SDDDIAAIDR WWE