Gene Dshi_0600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0600 
Symbol 
ID5712054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp592010 
End bp593416 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content65% 
IMG OID641266503 
ProductMORN repeat-containing protein 
Protein accessionYP_001531947 
Protein GI159043153 
COG category[S] Function unknown 
COG ID[COG4642] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.347615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAGCG TGGCTGTGGT CACCCTGTTC GTTGCGGCAG GATCCGTGCA GGCGCAGGAC 
GCGCAGGTGG TCAAGCAATT CGACGATGGC GGCATCTACG AAGGCAGCTT CGTCGACGGG
TTGCAGGACG GGGTGGGCAC CTACACCCTG CCCAACGGCT ATGTCTACAC GGGCGAGTGG
GAACGGGGCG AGATCAAGGG CCAGGGCGAG GCGCGCTTTC CCAACGGATC GGTCTATGTG
GGCACATTCG CCAAGGGCAA ACCCGAAGGC CAGGGCCGGA TCACCTATGC CGACGGGTCG
ACCTATGAAG GCGCCTGGGT GGACGGCAGA CGGACTGGCA CCGGCACGGC CAGCTATGCG
GATGGGTCGA TCTATGTCGG TGACTTCCTG AACGGACGGC AGCACGGCCA GGGGCGGATG
GAAACCGCCA GCGGCTATGT CTATGACGGG GATTGGGCCG ATGGGGAGAT GACCGGCCGC
GCCGTGATCA CCTATGCGGA TGGCGCGGTC TACGAGGGAG AGGTGGTGAA CGGGGTCCGC
ACCGGCACCG GATCGGTGAC GACGCCCGAT GGCCTCGCCT ATACCGGGTC CTGGCGCAAC
GGGCAGTTCG ACGGCGAAGG TCGGCTGGTC CAGCCCAATG GCGACATCTA CGAAGGCACG
CTTTCGGAGG GGAAACTGCA GGGATCGGGC GTCATGCTCT ATGCCAATGG CTGGCGTTAC
GAAGGCACGT TCGACCGCGA CATGCGCCAC GGCCAAGGCG TTTTCGAAGG GCCGGACGGC
TACCGCTACG AAGGCACCTG GATCGAGGGG CGCATCGAGG GGGACGGCAC GGTCACCTAT
CCCGACGGCT CGCGCTACGT GGGCAGTTTC GTGGATGAAA AGCCCGAGGG CGTCGGCGAG
ATCACCTACC CTGACGGGTC GACCTACACC GGCACCTGGG TGGCGGGTGT GATCGAAGGC
GAAGGCATCG CGCGCTATGC CAATGGCATC GTCTACGAGG GCGCGTTCCG CAATGCGCTG
TCCGATGGCA CCGGGACGAT CACCTATCCC AACGGATACA GCTATACCGG CTCCTGGGTT
GCGGGTGAAA AGCAGGGGCA AGGTACGGCC ACCTACCCGG ATGGCTCTGT CTACCAGGGC
GAATTCGTCG GCGGGGTGCG CGAAGGCGAG GGCGTTGTCG CCCTGGCCGA CGGGTTCCGG
TACGAAGGCA GCTGGCAGGG CGGCGAGATC AACGGATTCG GGCGCGCGAC CTATGCCAAT
GGCGACGTGT ATGAAGGGTT TTTCGAGAAC GGAAAACGGG TGGGTCAAGG CACCCTGCGC
TATTTCAGCG GACAGGTGGA AACCGGCGAG TGGCGCAACG GCGTTCTGGT CCAGCCCGCG
GCGGAACCCG CGCCCGCATC CGAGTAG
 
Protein sequence
MRSVAVVTLF VAAGSVQAQD AQVVKQFDDG GIYEGSFVDG LQDGVGTYTL PNGYVYTGEW 
ERGEIKGQGE ARFPNGSVYV GTFAKGKPEG QGRITYADGS TYEGAWVDGR RTGTGTASYA
DGSIYVGDFL NGRQHGQGRM ETASGYVYDG DWADGEMTGR AVITYADGAV YEGEVVNGVR
TGTGSVTTPD GLAYTGSWRN GQFDGEGRLV QPNGDIYEGT LSEGKLQGSG VMLYANGWRY
EGTFDRDMRH GQGVFEGPDG YRYEGTWIEG RIEGDGTVTY PDGSRYVGSF VDEKPEGVGE
ITYPDGSTYT GTWVAGVIEG EGIARYANGI VYEGAFRNAL SDGTGTITYP NGYSYTGSWV
AGEKQGQGTA TYPDGSVYQG EFVGGVREGE GVVALADGFR YEGSWQGGEI NGFGRATYAN
GDVYEGFFEN GKRVGQGTLR YFSGQVETGE WRNGVLVQPA AEPAPASE