| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0596 |
|---|
| Symbol | leuA |
|---|
| ID | 5712050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 587090 |
|---|
| End bp | 588667 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641266499 |
|---|
| Product | 2-isopropylmalate synthase |
|---|
| Protein accession | YP_001531943 |
|---|
| Protein GI | 159043149 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
|---|
| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACA AAACCGATCA GGACCGCGTG TTGATCTTCG ACACGACCTT GCGCGACGGC
GAGCAGAGCC CGGGCGCAAC CATGACCCAT GACGAGAAGC TGGAGATTGC CGCGCTGCTC
GACGAGATGG GCGTCGACAT CATCGAGGCC GGGTTCCCCA TCGCGTCGGA CGGGGATTTC
GCCGCCGTCA GCGAGATCGC CAAGAATTCC GTGAATTCGG TGATCTGCGG GCTTGCGCGG
GCCAACTTCA AGGATATCGA CCGCTGCTGG GAGGCGGTGC GCCATGCTCG GCAACCGCGC
ATTCACACCT TCATCGGCAC TTCGCCCCTG CACCGCGCGA TTCCGAACCT GACCATGGAC
GAGATGGCGG ACCGCATCCA TGACACGGTG ACCCATGCGC GCAATCTGTG CGACAACGTG
CAGTGGTCGC CGATGGATGC GACACGCACG GAATACGACT ATCTCTGCCG GGTCATCGAG
ATCGCCATCA AGGCAGGCGC CACCACGATC AACATCCCCG ACACGGTCGG CTATACCGCC
CCGCGCGAGA GCGCCGATCT GATCGCGCGC CTGATCGCCG ATGTGCCGGG TGCCGAAGAC
GTCACTTTCG CCACCCACTG CCACAACGAC CTCGGGATGG CGACGGCCAA TGCGCTGGCG
GCCGTCGATG CCGGGGCGCG CCAGGTCGAA TGCACGATCA ACGGGTTGGG GGAGCGCGCG
GGCAACACGG CGCTGGAAGA GGTTGTCATG GCCCTGCGCG TCCGGAACGA CATCATGCCG
TACCAGACCC GCATCGACAC CCGCAAGATC ATGAACATCT CGCGCCGGGT CGCGGCGGTC
TCGGGCTTCG CCGTGCAGTT CAACAAGGCC ATCGTCGGCA AAAATGCCTT TGCGCACGAG
TCGGGCATCC ACCAGGACGG GATGTTGAAG AACGCCGAGA CCTTCGAGAT CATGCGCCCG
GAGGATATCG GTCTGAGCGA GACCAACCTA GTGATGGGCA AGCATTCGGG CCGCGCGGCA
TTGCGCGCCA AGCTCAAGGA CCTCGGCTAC GAGTTGGCCG ACAATCAGCT CAAGGACGTG
TTCGTCCGGT TCAAGGCCCT CGCCGACCGC AAAAAGGAGA TCTACGACGA GGATCTCGTC
GCGCTGATGT CCGAATCCAG CAGCGATCCG GCGCGGGAGC GGCTGTCGGT GAAATTTCTG
CGCGTGATCT GCGGCACCGA AGCGCCGCAA TCAGCGGACC TGACCCTGTC CATCGACGGG
GTGGACAAGC AGGTGACCGC CCAGGGCGAT GGCCCCGTGG ATGCCACGTT CAACGCGGTC
AAGGCGCTGT TTCCCCATAC GGCGCGGCTG CAACTCTACC AGGTGCATGC GGTGACCGAG
GGGACCGACG CCCAGGCCAC CGTGACCGTT CGCATGGAAG AAGACGGGCG CATTGTGTCC
GGCCAGGCGG CCGACACGGA CACGGTCGTC GCCTCGGCCA AGGCCTATGT CGCCGCGCTC
AACCGGTTGA TCCTGCGACG CGAGAAGTCG CCTCTGGGCA GTGATCGCAA GGAAGTGTCC
TACAAGGACG TGAGCTGA
|
|---|
| Protein sequence | MTDKTDQDRV LIFDTTLRDG EQSPGATMTH DEKLEIAALL DEMGVDIIEA GFPIASDGDF
AAVSEIAKNS VNSVICGLAR ANFKDIDRCW EAVRHARQPR IHTFIGTSPL HRAIPNLTMD
EMADRIHDTV THARNLCDNV QWSPMDATRT EYDYLCRVIE IAIKAGATTI NIPDTVGYTA
PRESADLIAR LIADVPGAED VTFATHCHND LGMATANALA AVDAGARQVE CTINGLGERA
GNTALEEVVM ALRVRNDIMP YQTRIDTRKI MNISRRVAAV SGFAVQFNKA IVGKNAFAHE
SGIHQDGMLK NAETFEIMRP EDIGLSETNL VMGKHSGRAA LRAKLKDLGY ELADNQLKDV
FVRFKALADR KKEIYDEDLV ALMSESSSDP ARERLSVKFL RVICGTEAPQ SADLTLSIDG
VDKQVTAQGD GPVDATFNAV KALFPHTARL QLYQVHAVTE GTDAQATVTV RMEEDGRIVS
GQAADTDTVV ASAKAYVAAL NRLILRREKS PLGSDRKEVS YKDVS
|
|---|
| |