Gene Dshi_0587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0587 
Symbol 
ID5712041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp578470 
End bp578814 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content66% 
IMG OID641266490 
Productputative transcriptional regulator 
Protein accessionYP_001531934 
Protein GI159043140 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGA AAACCGACTC ACGCGCCCAA GCGGCGGCTG CCTTTGCCGC CCTTGGTGCC 
CCCCAGCGCC TCGGCGTGCT CGAAGTGCTG GTGCGCGCAG GTCCCGAAGG GCTGCCCATC
GGTGTTCTCG GGGCACGGGC CGGTGTCAGC GGATCGACCC TGACACATCA TGTCAAAACC
CTCGTGCAGG CTGGTCTCGT CCAGCAGACC CGCGAGGGTC GGATCATCCG CTGCACCGTC
GTCTATGACC GGGTGACGGG CCTTTCCGAC TACCTTCTGG CGCAATGCTG CGCCGATACG
CCCACAGGAC ACGACCATGG CCGAGACCTC CACACAGCCT CCTGA
 
Protein sequence
METKTDSRAQ AAAAFAALGA PQRLGVLEVL VRAGPEGLPI GVLGARAGVS GSTLTHHVKT 
LVQAGLVQQT REGRIIRCTV VYDRVTGLSD YLLAQCCADT PTGHDHGRDL HTAS