Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0587 |
Symbol | |
ID | 5712041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 578470 |
End bp | 578814 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641266490 |
Product | putative transcriptional regulator |
Protein accession | YP_001531934 |
Protein GI | 159043140 |
COG category | [K] Transcription |
COG ID | [COG0640] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACGA AAACCGACTC ACGCGCCCAA GCGGCGGCTG CCTTTGCCGC CCTTGGTGCC CCCCAGCGCC TCGGCGTGCT CGAAGTGCTG GTGCGCGCAG GTCCCGAAGG GCTGCCCATC GGTGTTCTCG GGGCACGGGC CGGTGTCAGC GGATCGACCC TGACACATCA TGTCAAAACC CTCGTGCAGG CTGGTCTCGT CCAGCAGACC CGCGAGGGTC GGATCATCCG CTGCACCGTC GTCTATGACC GGGTGACGGG CCTTTCCGAC TACCTTCTGG CGCAATGCTG CGCCGATACG CCCACAGGAC ACGACCATGG CCGAGACCTC CACACAGCCT CCTGA
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Protein sequence | METKTDSRAQ AAAAFAALGA PQRLGVLEVL VRAGPEGLPI GVLGARAGVS GSTLTHHVKT LVQAGLVQQT REGRIIRCTV VYDRVTGLSD YLLAQCCADT PTGHDHGRDL HTAS
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