Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0567 |
Symbol | |
ID | 5712020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 555614 |
End bp | 556162 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641266469 |
Product | TonB family protein |
Protein accession | YP_001531914 |
Protein GI | 159043120 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.584619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCCCC CCGACCCTGC CACACCGCCG CCCCCGCCTG CGCCGCCTGC CCCGCCGGAG CCCGCGGTCG CGCAAGCCCA GCTGCCCGAG GCCGCCAAGT CACCGCCCGC GCCACGGCCA GAGCGCGCAC AAGCGCCAAA AGCAGAAACA GCGGCTGCGC CGCAACCCGC CGCGCCGCCG CAGAAAGCCC AAAGGGCGAA AGGTGACGGC GATGCGGCAG CGGCCGGTCG CGGAACGCAG ACCGACATAT CCAGCCTCAG CCCCGGTGTC CGCGAGCGCC TCATGACACG CTGGGGCAGT CAGATCCGGG CCCGAGTCGA ACGGCGCAAA CCCTCGGGAA CACGAGACCG CGGCACGGCC GTCGTTCGAT TGGTGGTGTC GACCGAAGGT CAGCTGGTTG CCGTCAGTCT GGCGCAAAGT TCAGGCGTGG CCGCGATAGA CGCCGCCGCG ATCAGCGCGG TCCAGCGCGC AGGCAGGTTC CCCAAGGCGC CCAGGGACCT CGATGGCACG CAACATGCCT TCACCTTGCC CATTCGGTTC GGAAGGTAG
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Protein sequence | MPPPDPATPP PPPAPPAPPE PAVAQAQLPE AAKSPPAPRP ERAQAPKAET AAAPQPAAPP QKAQRAKGDG DAAAAGRGTQ TDISSLSPGV RERLMTRWGS QIRARVERRK PSGTRDRGTA VVRLVVSTEG QLVAVSLAQS SGVAAIDAAA ISAVQRAGRF PKAPRDLDGT QHAFTLPIRF GR
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