| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0541 |
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| Symbol | hemN1 |
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| ID | 5711994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 526456 |
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| End bp | 527820 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641266443 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_001531888 |
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| Protein GI | 159043094 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAACA AGACCGTGGA TGAAATCGTC GAGAAATATG CGCGCGTGGC GACCCCGCGC
TACACCAGCT ACCCCACGGC GCCGCATTTC GAGCCCGCGT TTCCCGAGGT GACCTATCGC
GGATGGCTGA GCGCGCTCGA TGCGTCGGAG CCGATCTCTC TTTATGTCCA CATCCCCTTC
TGTCGCGAAA TGTGCTGGTA TTGCGGCTGC AACATGAAAC TCGTCAAGCG CGAAGGCCCG
CTTGCCGAAT ATGTCGAGAC GCTGCTGAAG GAAATCGCTC TTGTGCGGGC GGCGATGCCG
GGGCGCGTAC CGGTGGCGCA TCTGCATTGG GGCGGTGGGA CGCCAACCGC ATTGTCGCCG
GACCAGATTG CCCGGATCAT GGACGCCTTG CGGGCGTCCT TCGACATCCT GCCGGATGCC
GAGATCGCCA TCGAGAGCGA CCCGCGTACC CTGACGGAGC CGATGGTGGC GCGGCTGGCA
GAACTCGGTT TCAATCGGGC CAGTTTCGGT GTGCAGGAAT TCGACCCGAA GGTGCAGCGC
GCCATCAACC GTATCCAGCC GCCGGAAATG GTTGCAAAGG CGGTCGGCAT GTTCCGGCGG
CACGGCATCG CGGCAGTCAA TTTCGATCTG ATCTACGGGC TCCCGTACCA GAGTGTCGAG
ACGCTGCTGC ACACGGTGGA CCTGGTTTCC GAAATGGGCC CGGACCGGAT TGCGCTCTTC
GGGTACGCCC ATGTCCCCTG GGTCGCCAAG GCGCAGCGGA TGATCCCGGA GGAGTCCTTG
CCGGACGCAC GGGCGCGGGC GGCGCAAGCG TCCGCTGCGG CGCGTGCGCT GACCGAGGCC
GGGTATCGCG CCATCGGCAT CGATCATTTT GCCAAGCCCG AAGACGGGCT CGCCCGGGCG
CAGGCCGAAG GGCGGCTCTA TCGCAATTTC CAAGGCTACA CGGACGATCC TGCGGCCACC
CTGGTTGGTC TGGGCGCGAC CTCTATCGGG CGGACGCCGC AGGGCTATAT CCAGAACCAA
CCTGAGACCC GCGCTTGGGC GCGCGCCATC GAAAACGGTG CGCTACCGGT TGCCAAGGGT
CGCGCCTTCG CAGGCGAGGA CCTGATGCGT GCCGCGGTGA TCGAACGGAT CATGTGCGAC
GGTTACGTGG ACCCGGATGC TATTGGTGCG CGCTACGGGG TGCCTGCCGG ATGGTGGGGA
CCCGAGCGTG ATTCACTGCG GGATATGGAG CGGGATGGAC TTGTCCAATG CGGCGCGACG
GGCCTGCGCG TGACCTCCAA AGGCGCCCCG CTGGCACGGG TCGTGGCAGC GGCATTCGAT
AGCTATTTCG CTGCTTCCAA GGCCCGCCAT TCCGTGGCGT TGTAA
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| Protein sequence | MRNKTVDEIV EKYARVATPR YTSYPTAPHF EPAFPEVTYR GWLSALDASE PISLYVHIPF
CREMCWYCGC NMKLVKREGP LAEYVETLLK EIALVRAAMP GRVPVAHLHW GGGTPTALSP
DQIARIMDAL RASFDILPDA EIAIESDPRT LTEPMVARLA ELGFNRASFG VQEFDPKVQR
AINRIQPPEM VAKAVGMFRR HGIAAVNFDL IYGLPYQSVE TLLHTVDLVS EMGPDRIALF
GYAHVPWVAK AQRMIPEESL PDARARAAQA SAAARALTEA GYRAIGIDHF AKPEDGLARA
QAEGRLYRNF QGYTDDPAAT LVGLGATSIG RTPQGYIQNQ PETRAWARAI ENGALPVAKG
RAFAGEDLMR AAVIERIMCD GYVDPDAIGA RYGVPAGWWG PERDSLRDME RDGLVQCGAT
GLRVTSKGAP LARVVAAAFD SYFAASKARH SVAL
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