| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0533 |
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| Symbol | |
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| ID | 5711986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 518039 |
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| End bp | 518887 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641266435 |
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| Product | xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_001531880 |
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| Protein GI | 159043086 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.605213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGGTT TCGGCGTTCA TACGAGCATG TGGACCATGA CATGGGACCA GGCCGGTTGC
GAGAAGGCGG TCGCGAAGGC CAGGGCCTAT GGCATGGATT TTCTGGAAAT CGCACTTTTG
GACCCGCCCA ACGTCGATGC CGCACACAGC CGGTCGGTGC TCGAGGCGGC CGGGATGCGC
GCGGTCTGTT CGCTTGGCCT GCCGCAGGAG GTCTGGGCAT CGCGCAATCC CGAAGGTGCT
GTCGATTTCC TGACTATTGC GCTGGACAAA TGCGCGGCCA TGGGGGCTGA GGCGTTGTCC
GGCGTTGTCT ATGGCGGCAT CGGGGAGCGA TCGGGCAAGC CCCCGACGCG GGCCGAGTTG
GACAATGTCG CAGATGCCCT GACACGGGCC GCGCGACATG CCAGATCTCT CGGGCTGCTG
TTCGGGATTG AGCCGGTCAA TCGATACGAG ACCCATTTGC TCAACACCGG CTGGCAGGCC
GTCGAGATGA TCGAGCGCAT CGGGGCGGAG AACATGTTCA TCCATCTCGA CACATATCAC
ATGAACATCG AAGAAAAGGG CATCGCGCAA GGCATCATCG ATGCGCGTGA GCACCTGCGC
TACATCCACC TGTCGGAGTC CGACCGGGGC ACGCCCGGGG CCGGTACCAT CGCTTGGGAC
GAGATATTCA GCGCCCTCCG GGCGGTCGGA TTCAAGGGCG GTCTGGCAAT GGAGAGCTTC
ATCAACATGC ACGCGGAGAT CGCCGAAGGG CTTTCGGTCT GGCGGCCCGT TGCCTCAGGC
GAGGCGGAGG TGATGGAAAA CGGCCTGCCC TTTTTGCGCA ACAAGGCGCG TCAATACGGC
CTCATCTGA
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| Protein sequence | MEGFGVHTSM WTMTWDQAGC EKAVAKARAY GMDFLEIALL DPPNVDAAHS RSVLEAAGMR
AVCSLGLPQE VWASRNPEGA VDFLTIALDK CAAMGAEALS GVVYGGIGER SGKPPTRAEL
DNVADALTRA ARHARSLGLL FGIEPVNRYE THLLNTGWQA VEMIERIGAE NMFIHLDTYH
MNIEEKGIAQ GIIDAREHLR YIHLSESDRG TPGAGTIAWD EIFSALRAVG FKGGLAMESF
INMHAEIAEG LSVWRPVASG EAEVMENGLP FLRNKARQYG LI
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