| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0532 |
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| Symbol | deoR2 |
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| ID | 5711985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 517065 |
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| End bp | 518039 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641266434 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001531879 |
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| Protein GI | 159043085 |
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| COG category | [K] Transcription |
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| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGATGC AGAAACGCCA GGCAGATGAT GACATCGCAC AGGCGGCTTG GTTGTATTAT
GTGGGCAATC TGAGCCAACA GGAGGTCAGC AAGCGGCTGG GGGTTTCCCG GTTCAAGGTG
CTGCGCATGC TTGCGGATGC GCGCGACCAG GGGCTGGTGC GAGTCGCGGT CGAGCATCGC
ACATCACGGG CCTTGTCGCT GGCCGACAGA CTGGTCACGG CCTTCGGGCT GCAAGAGGTG
CAGGTGGCGC CGATCGGCGC AGATAGCGGC GACGAGGTCT TGTCGCGCAA CGCTGTTGCC
ATCCTGGCCA GCGGGTACCT TTCCCGAATT GCCGCGTCCG ACAGTCAGGC CACCATCGGT
TTGGGCTGGG GGCGGACCCT GTCTGCCATG GCGGACAATC TGACCGGCGT GCGCCATCCG
GGCCTGACAT TCGTGTCGCT GATGGGGTCG GTGACTTACG CCTCGCACAC CGCACCGGGC
GACGTCTGCG TGCGACTGGC CGCCCAGACC GGCGGTCGCG CGATCCTGAT GCCAGCGCCG
TTCGTGACCG ACAGTGCAGA TGCCTGCGCT GGCATCATGT CACAGCGTCT GGTCCGCGAA
GCGATGAGTG TCGCCCGCAA GGCCGACCAT GCTTTGATGA GCGTCGGAGA ATGCCGCGAG
GGCGCGATCC TGTTCGACAG CGATATCTTC ACCCCGGCGC AGATCCAGCA ATTGCGCGAT
GCCGATGTCG TCGGGGATTG CTGCGGCGTT TTCTACAAGG CCGATGGCTC CGTGGCCGAT
ATCGAATTGA ACCGCTGCAC GCCATGTGTG CAACCGCAGG ACATGGGCGC GATGGACACG
GTTCTGCTGG CCGGTGGCGC GGGCAAGCTG ACGGCAACCC TTGCAGTGCT GCGGGCCGGC
TTCGTGAAGA AACTGCTGAT CGATGAGGGG CTCGCCACCA AGTTGGTCAC AGCAAGTGAG
CATGTGGGGG TGTAA
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| Protein sequence | MLMQKRQADD DIAQAAWLYY VGNLSQQEVS KRLGVSRFKV LRMLADARDQ GLVRVAVEHR
TSRALSLADR LVTAFGLQEV QVAPIGADSG DEVLSRNAVA ILASGYLSRI AASDSQATIG
LGWGRTLSAM ADNLTGVRHP GLTFVSLMGS VTYASHTAPG DVCVRLAAQT GGRAILMPAP
FVTDSADACA GIMSQRLVRE AMSVARKADH ALMSVGECRE GAILFDSDIF TPAQIQQLRD
ADVVGDCCGV FYKADGSVAD IELNRCTPCV QPQDMGAMDT VLLAGGAGKL TATLAVLRAG
FVKKLLIDEG LATKLVTASE HVGV
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