| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0531 |
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| Symbol | araF1 |
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| ID | 5711984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 515852 |
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| End bp | 516841 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641266433 |
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| Product | ribose/xylose/arabinose/galactoside ABC-type transport system protein |
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| Protein accession | YP_001531878 |
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| Protein GI | 159043084 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACCA AATTCACACT TCTGGCCAGC GTGGCAATGG CGTCGTCGGC ACTTTTTGCG
ACACAGGCGG TGGCAGACGG CCACTCCAAG GATATCGCAA CCGTGGTCAA GATTGCCGGC
ATCCAGTGGT TCAACCGCAT GGAAGAAGGC GTCAAGAAGT TTGCCGAGGA AACGGGCATG
AACGCGTTTC AGGTCGGCCC CGCCCAAGCA GATCCGCAGC AGCAGGTCGC GCTGATCGAG
GACATGATTG CCCAGGGCGT CGACGCGCTT GCCGTCGTGC CGATGTCCCC CGAAGCACTT
GAGCCGGTCC TGGGCCGCGC GATGGAAGCA GGCATAACCG TCATCACTCA CGAGGCGGCG
GCCCAGCAGA ACACGACCTA TGACCTTGAG GCATTCGTCA ACGAAGACTT CGGCGCGAAC
CTGATGGAAC AGCTTGCCAC CTGCATGGGC GGCGAGGGCG AATACGCGGT GTTCGTCGGA
TCGCTGACCT CCCAGACGCA CAACCAGTGG GTAGATGGTG CCATCGCCTA CCAAGAGGCT
AACTATCCGA ACATGACGCT GGTCGGCGAC AAGAACGAGA CCTTCGACGA CGCCGAGCAG
GCCTACACCA AGACGCAGGA GGTCCTGCGC GCGTTTCCGA ACATCAAGGG CATGCAAGGC
TCTGCTTCGA CGGATGTCGC GGGCATCGGG CGCGCCATCG AAGAGCGCGG CATGGAAGAC
GCCACCTGCG TTTTCGGCAC CTCCCTGCCC TCCATCGCCG GTCAGTATCT TGAAACCGGC
GCGGTGGACG GCATCGGCTT CTGGGATCCG GCGGTTGCAG GCGAGGCCAT GAACAAGCTC
GCGGTGATGG TGATGAACGG CGAGGAAGTC ACCGACGGCA TGGACCTTGG ACTGCCGGGC
TATGAGAGCG TTTCGCTCGA TGGCAAGGTC ATCTACGGCC AGGCATGGGT AAATGTCGAT
GCGGAAAACA TGAGCGAATA CCCGTTCTGA
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| Protein sequence | MKTKFTLLAS VAMASSALFA TQAVADGHSK DIATVVKIAG IQWFNRMEEG VKKFAEETGM
NAFQVGPAQA DPQQQVALIE DMIAQGVDAL AVVPMSPEAL EPVLGRAMEA GITVITHEAA
AQQNTTYDLE AFVNEDFGAN LMEQLATCMG GEGEYAVFVG SLTSQTHNQW VDGAIAYQEA
NYPNMTLVGD KNETFDDAEQ AYTKTQEVLR AFPNIKGMQG SASTDVAGIG RAIEERGMED
ATCVFGTSLP SIAGQYLETG AVDGIGFWDP AVAGEAMNKL AVMVMNGEEV TDGMDLGLPG
YESVSLDGKV IYGQAWVNVD AENMSEYPF
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