| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0518 |
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| Symbol | araH1 |
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| ID | 5711433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 502175 |
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| End bp | 503185 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641266420 |
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| Product | ribose/xylose/arabinose/galactoside ABC-type transport system protein |
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| Protein accession | YP_001531865 |
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| Protein GI | 159043071 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACC GACTTCTCGA CATCGCCATT CGCTATGGCT TCCTGATGCT CCTGTTCGGG
TTGATCGTGT ATTTCAGTCT CGCCGCGCCG GGCTTCCTCG GGCCTTTGTC GGCGGCCTTC
GTGCTGCAAT CCGTGGCGAT CACCGGTATT CTTGCCCTTG GGGTGACCTG CACCCTGGTG
GTCGGCGGAT TTGACTTGTC AATCGGCGCG GTGGCGACAT CGGCGCTGAT GCTGTCGGCC
TATTCCATGG TGATCCTCGA ACACCCGGCA ATCGTCGCGG TTCTGTTATG CCTCGCGATG
GGGGCCCTGG TCGGGTTCAT CAACGGATTG CTGATCGTGA AATTCCGGGT GCCCGATCTG
CTGGCGACGC TGGGCATGAT GTTTCTGCTG ATCGGTCTGC AACGCATTCC GACCCAGGGT
AATTCCATCG CTACGGGGAT GACCCTGTCC GATGGTACCG TGGCCGAGGG CACCTTTTCG
GCGGCCTTCC TCTGGCTGGG GCGTCACCGG TTCGATGTGG TTATCGAGCG CCTGCTGCCG
ATGCCGGTGG TGATCTTTGT CGGGATCGCC GTTTTGATCT GGCTGTTTCT GGGCTTCACC
CGGCATGGAC GATTGATGTA CGCCATCGGG TCCAATGAAC GCGCCGCCGG TCTCGTCGGC
ACCCCGGTCA ACCGCTACAA GATCGCGGCC TACATGATCT CGGGCGTAAC CGCGTCCATC
GGGGGTATCC TGCTGGCTGC CCGTCTGGGA CGGGGCGACA TTGCCAGCGG CAACAACCTG
CTGCTCGATT CCGTGGCGGC CGCGTTGATA GGGTTCGCGG TTCTGGGCGC AGCCCGACCC
AACGCTTTCG GCACCGCCAT GGGCGCGCTT TTCGTGGGCA TCCTGCTGCA GGGTATGACG
ATGATGAACG CGCCCTACTA CACGCAGGAT TTCGTCAAGG GCGCGGTCCT GGTCGCCGCC
CTTGTCTTCA CTTTCTACCT GTCCTCGCGC CGCAGCGGCC CGGGGCATTG A
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| Protein sequence | MNDRLLDIAI RYGFLMLLFG LIVYFSLAAP GFLGPLSAAF VLQSVAITGI LALGVTCTLV
VGGFDLSIGA VATSALMLSA YSMVILEHPA IVAVLLCLAM GALVGFINGL LIVKFRVPDL
LATLGMMFLL IGLQRIPTQG NSIATGMTLS DGTVAEGTFS AAFLWLGRHR FDVVIERLLP
MPVVIFVGIA VLIWLFLGFT RHGRLMYAIG SNERAAGLVG TPVNRYKIAA YMISGVTASI
GGILLAARLG RGDIASGNNL LLDSVAAALI GFAVLGAARP NAFGTAMGAL FVGILLQGMT
MMNAPYYTQD FVKGAVLVAA LVFTFYLSSR RSGPGH
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