Gene Dshi_0507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0507 
Symbol 
ID5711423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp492087 
End bp493133 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content61% 
IMG OID641266411 
ProductMRP-like protein 
Protein accessionYP_001531856 
Protein GI159043062 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0489] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.4794 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGACG GCACGCCCTT TCTTGGCGCT CCGCAGGTGT CGGGGCCGGT TCTGTCCGGT 
GGTCGTATCA GTTTATCGAT AATGACAACG GCCGCGGGCG CCGCGTCTCT CGGCGAGACA
AGATCCAAGG CCGAGGCGGC CTTGCGCGCC ATACCAGGGG CTGAGACGGC CTTTGTTACC
CTGACCAATG ATGCAGCCGC TGCTCCACCG GTCCTCAAAC AACCAAATGC CGCGAAGCCC
GCGGTGTTGG CCGAGGTCGC GCATGTGGTG GCCGTTGCCT CTGGCAAGGG AGGGGTTGGC
AAATCGACCA CTGCCGTAAA CCTTGCCTTG GGTCTGCGTG CAAACGGTTT GAAGGTGGGC
ATTCTGGACG CGGACATCCA CGGCCCCTCC ATCCCGACGC TGCTTGCTCT TCATGGGCAA
CCTCGCATGG GCAAGGATCG CAGGCTTCTG CCGATGCAGT CCAACGGAAT ATCGGCCATG
TCCATGGGTA TGATGGTCGA TGCCGAGACG GCGATGGTCT GGCGCGGTCC CATGGTGATG
TCGGCGATCA CGCAAATGCT GGCGGAGGTT AACTGGGGTG CCCTGGATGT TCTGATCGTC
GACATGCCGC CCGGCACCGG CGATGCGCAA CTCGCGATCG CCCAAGGCAC GAAGCTGGCG
GGTGCCGTGA TCGTTTCGAC CCCACAAGAC CTGGCCCTGA TCGATGCGCG TCGTGGCATT
GCGATGTTCA AAAAGGTGGA TGTGCCGATC CTTGGCTTGA TCGAGAATAT GGCGCATTTC
ACCTGCAACG ACTGCGGCAA ACAGCACGCA CTTTTCGGTA CCGGGGGAGC GGAAGCTGAA
GCCAAGCGTT TGAATGTGCC GTTCTTGGGG GCAGTGCCGC TCACAATGGA CTTGAGGGCC
GCATCCGACA GCGGCCAGCC CATCGTGGTC CGCGATCCGG AGGGCCCTCT GGGCAAGCTT
TACGTCGAGA TGGCAGGAGC CCTTTGGGCC AATCTGGTAG CCTCATCCTC AAAATACCAA
TCACCAAGAA AACTACAAGG AGCCTGA
 
Protein sequence
MPDGTPFLGA PQVSGPVLSG GRISLSIMTT AAGAASLGET RSKAEAALRA IPGAETAFVT 
LTNDAAAAPP VLKQPNAAKP AVLAEVAHVV AVASGKGGVG KSTTAVNLAL GLRANGLKVG
ILDADIHGPS IPTLLALHGQ PRMGKDRRLL PMQSNGISAM SMGMMVDAET AMVWRGPMVM
SAITQMLAEV NWGALDVLIV DMPPGTGDAQ LAIAQGTKLA GAVIVSTPQD LALIDARRGI
AMFKKVDVPI LGLIENMAHF TCNDCGKQHA LFGTGGAEAE AKRLNVPFLG AVPLTMDLRA
ASDSGQPIVV RDPEGPLGKL YVEMAGALWA NLVASSSKYQ SPRKLQGA