Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0494 |
Symbol | nnrS |
ID | 5711410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 478748 |
End bp | 480028 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641266398 |
Product | NnrS family protein |
Protein accession | YP_001531843 |
Protein GI | 159043049 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3213] Uncharacterized protein involved in response to NO |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.506659 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.505655 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTGCG GCCCCGCCAC CGGGCGCAGC CGACCCCTGC CCCGGGGTCC GCTCGCCACC CTCGGCGATG AGGGGTTTCG CCTGTTCTTT CTGCTGGGGG CGCTCTACGC GGCGCAGTTC CCCGCGCTCT GGGTCCTCGC ATGGGGATTG GATCTGCCGA TGGCGCAGGA CGTGCCCCCG GCCCTCTGGC ACGCCCATGA AATGCTGATC GGGGCGTTCG GCGCCGCATT GATCGGCTTC GTCACCACCG CCGCGCCGGA ATGGACCGAT ACCGAGCCGC CACGGGGTCG CCCGCTCTGG GCGCTGGCGG GGCTCTGGGC GGTCGGGCGC ACCGTTGGAC TTTTCGGCTG GGATGCGTTC GGGGCCGTCG GCGCACTGGC GGATCTCGGC TGGATGTGCG CGCTGACCGT TTGGCTGGGG GTCCTGTCGA TCCGCCGACG CACCGACCGG CTGGTCGCCT TCATCGCCTG GCTGGCGATC CTCACGGTCT GTACGGCCGT GGGCCACTTC GGCTTTGCCA CCGGAAATCT CACTCTGGCA ACCCAGAGCA TTCACCTCGC CGGGTTCGCC CTTCTGGGGC TTCTGGGCCT CGCCTTGTCG CGGATTACCG CGCCAGTGAC GAACCTCGTG CTCGATCCGA CCGAGCGAAC CTCGCCCTTC CGGCCCCATC CCGGTCGATT GCATCTTGCG CCCGGCCTAG TCCTCGTGGT GATGGCGGGC GACCTGCTCG GTGTCAGTCC CGCAGTCTCC GCCTGGCTAT TGGTCGCCGC CGGGGCAGCG TTCATGGACC GCGTCGGCGA AGCTTTCATC GGGCGCGAGA TTGCCATGGC CGAGATTCTC TTGCTTGCAG GCTCCAGCGC GCTGGCGGGA CTCGGCCTCA TCCTCGCGGG GGCTGCGCGT CTCGGGGCAC CCTGGCCGGA GGTCACGGGG TTGCACATCG CCTTCATGGG CGGTCTCGGG CTTGGCGTCT ATGCGGTCTA CTGCATCGCG GGCCTTCTGC ACACGGGCCG GCCGCTCGGC CTGTCGCGCG CTGCCCGGCT CGGCGCCGGG ATGCTGGTCG CATCCGTCAT GCTCCGTGTG GCGCCTGATC TCGGCCTGTC CCTGCCCCTT CCTGCGCCCG CGCTTGCCTC CGGGACCTGG ACGGCTGCCT TCCTGCTGTG GGCGATAGCC TACTGGCCCG CCCTGTCCCG CGTCGCCCTG CCGGAAGGTC CGCCGGACCG GGCCGCGTCG AAACCTCACC TGCCCGCCGC ACCCGTCCGG TTCCCCGAGG CGGCGGAATA G
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Protein sequence | MSCGPATGRS RPLPRGPLAT LGDEGFRLFF LLGALYAAQF PALWVLAWGL DLPMAQDVPP ALWHAHEMLI GAFGAALIGF VTTAAPEWTD TEPPRGRPLW ALAGLWAVGR TVGLFGWDAF GAVGALADLG WMCALTVWLG VLSIRRRTDR LVAFIAWLAI LTVCTAVGHF GFATGNLTLA TQSIHLAGFA LLGLLGLALS RITAPVTNLV LDPTERTSPF RPHPGRLHLA PGLVLVVMAG DLLGVSPAVS AWLLVAAGAA FMDRVGEAFI GREIAMAEIL LLAGSSALAG LGLILAGAAR LGAPWPEVTG LHIAFMGGLG LGVYAVYCIA GLLHTGRPLG LSRAARLGAG MLVASVMLRV APDLGLSLPL PAPALASGTW TAAFLLWAIA YWPALSRVAL PEGPPDRAAS KPHLPAAPVR FPEAAE
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