| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0492 |
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| Symbol | ssuC1 |
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| ID | 5711408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 477181 |
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| End bp | 478005 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641266396 |
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| Product | sulfonate/nitrate/taurine transport system permease protein |
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| Protein accession | YP_001531841 |
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| Protein GI | 159043047 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.218596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.461447 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCATC TCCTCCTGAT TTCCTTGGTG ACGCGCGTCG GTCGCGTCGG GGCCTTTCTG
TGGTCGGGCT GGGCCGGGCT GGCGGCCCTG GCTCTGCTCT TTGCGGTCTG GCAAGCCGGG
CATGAGGCCT ACGGGCCTTT CATTCTGACA TCACCGCTCG ACACCATGCA GACGGTCGCA
TCCCTCGCGG GCGACCCCGC AGCCTGGAAA ATCGCCGCCC TGACGCTCCA GCGGGCTGTC
AGCGGCTTCT TTCTGGTCGC CGCGGTCGGC ACCGCGCTCG GCGTGGCAGC GGGCTATTTC
CCGGCGGTCC TGCGTTTGGT CACACCCCTT GTCACGGTCC TGCTCGGTGT GCCGCCGATT
GCCTGGATCG TGCTGGCGAT GATCTGGTTC GGTGGCTCCG ACGCGACGGT GCGCACGGTA
ATCCTGATCT CCGCCCTGCC GGTGGTCTTC ATGGGTGCGG CGCGGGGTAT CACGACCCGG
GATCGGCTGC TCGACCGAAT GGCCTCGGTC TTCGGCGCCG GGCCGGTGCG GCGGTTCATG
ACCATCGGCC TGCGGCAGAC CACCACAACC CTTTTTCCCG CCCTCGCCCT CGCCCTCGGC
ACCGCCTTCA AGGTGGCGGT GATGGCCGAA TTGCTGGCCA ATGCGGGTGG CATCGGTGGG
GCCCTCGCGG ATGCCCGCAT CAACCTCGAT ATCGGACTGG CCCTCGCCTG GGTGTTGATC
GCCGTCGCTC TGCTGATCGT GGTGGAATAC ACGCTGGTCC AACCCGTCAA AGCCGAGATC
GACCGCTGGC GGCACGCAGC CCAACCCTGG GGAGTGAAGC GATGA
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| Protein sequence | MSHLLLISLV TRVGRVGAFL WSGWAGLAAL ALLFAVWQAG HEAYGPFILT SPLDTMQTVA
SLAGDPAAWK IAALTLQRAV SGFFLVAAVG TALGVAAGYF PAVLRLVTPL VTVLLGVPPI
AWIVLAMIWF GGSDATVRTV ILISALPVVF MGAARGITTR DRLLDRMASV FGAGPVRRFM
TIGLRQTTTT LFPALALALG TAFKVAVMAE LLANAGGIGG ALADARINLD IGLALAWVLI
AVALLIVVEY TLVQPVKAEI DRWRHAAQPW GVKR
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