| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0491 |
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| Symbol | ssuA1 |
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| ID | 5711407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 476139 |
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| End bp | 477122 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641266395 |
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| Product | putative sulfonate/nitrate transport system substrate-binding protein |
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| Protein accession | YP_001531840 |
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| Protein GI | 159043046 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00141878 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.493343 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTTC TTTCCCGCCG ATCCACTCTC GCCCTGCTGG GCACGGCCGC TGGCGCCCTC
GCCCTGCCCC GCAGCGCCGC GGCACAGCCG ATCCCACGGC TGGCGCTCTA CGGGCCGCCG
GCCGGCCCCT CGATCACCTT GGCCCATGCG GTCAAGACCG GAATGCTGTC CGACATCGCC
GAGGAGACGC TCTTTACCCC ATGGCGCAGC CCCGACGAGT TACGGGCGGG GCTGACTTCG
GGCGAAATCC TTGTGTCCGT GGTGCCGATT CAAGCGGCCG CGAACTTCTA CAATCGCGGC
TTCCCGATCA GGCTGGAAAA CGCGATGACC AATGGCCTGC TCTACATCAT CGCCGAGGAA
ACAGGGATCG CGACGATCCC CGATCTCGCG GGTCGTCACA TCGCGGTGCC GTTCCGCGGC
GATACCCCGG AGATCATTTT CAGCCAACTC CTCGACCATC ATGGGATGCG TGCCGAAGAT
CTGAAAATCA CCTATGCGGG CACGCCCACC GAAGCCATGC AATTGATGCT GGCGGGCCAG
GTCGATGCCG CCCTTACCGC CGAGCCCTCG ACCACCGCGG CGGTGCTGCG CGGGCGCGAG
GCGGGCAAGC AGATCCGTCG CGCGATCAAC CTGCAGGCCG TCTGGGGCGA GATGACCGGG
GCCGCGCCGG TGCTGCCGCA GGCGGGGCTG GCACTGACGC CAACCTTCCT CGACACTTAC
GGTGACGCGG TTCCCGCCCT TCTGGCTGCG CTTGAACAGG CGACCGCCGA CGTTCTGGCC
AACCCCGAGG CAGCCGCGGC CCATGCCACC GAGGCGCTCG GCCTGCCCGC ACCGCTTCTG
GCGGCCTCGA TCCCCAATTC GAACCTGGTC GCCCGTCCGG CCAACGAAGC GCGGGCCGAC
ATCGAACGCC TGCTGGCGGC AATGGCGGGC CCGGATCTCG CTCGCATCGG CGGTGCGATG
CCGGACGACG CCTTCTATCT GTAA
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| Protein sequence | MTFLSRRSTL ALLGTAAGAL ALPRSAAAQP IPRLALYGPP AGPSITLAHA VKTGMLSDIA
EETLFTPWRS PDELRAGLTS GEILVSVVPI QAAANFYNRG FPIRLENAMT NGLLYIIAEE
TGIATIPDLA GRHIAVPFRG DTPEIIFSQL LDHHGMRAED LKITYAGTPT EAMQLMLAGQ
VDAALTAEPS TTAAVLRGRE AGKQIRRAIN LQAVWGEMTG AAPVLPQAGL ALTPTFLDTY
GDAVPALLAA LEQATADVLA NPEAAAAHAT EALGLPAPLL AASIPNSNLV ARPANEARAD
IERLLAAMAG PDLARIGGAM PDDAFYL
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