| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0485 |
|---|
| Symbol | |
|---|
| ID | 5711401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 470179 |
|---|
| End bp | 470616 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641266389 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001531834 |
|---|
| Protein GI | 159043040 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.788041 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.823231 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACACC TCATATGCGC AGCCGCTCTT ACCTGTTTCG GGGGGCCATT GGCTGCGGCG
CCGCTGTGTG ACGATCTGGG ATTTGCCGGA TTGTTGGCCA GCTGCAACCG GGGCGAGACG
ATCCAGTTGA CCCTCGCTTC GGGCAAGCCC CTTGGCGAGG ACGTGGTGCT CGAGTCCGGA
GCCTATTACA AGCTCGAGAT CACCGCCGAC GGTTCTGCCG AGCTGGCGAT CGAAGGACCC
AGCTTTTTTC GGGCGATCTG GATGAACGAG ATCGTCATCA ATCAGATCGA GATCCGCCCC
ATGGCCATCG ACTCGATCGA GTTCGACAAG GCCGGGGTCG CCGAGCTGTC GTTCATCGCG
ATAAAGCCTG GCCGCCATGT GCTGCGCATT CCCGGATCCA CCGGGGAAAG CCAGTCCGTC
ACCTTGTCCA TTCAGTAA
|
|---|
| Protein sequence | MRHLICAAAL TCFGGPLAAA PLCDDLGFAG LLASCNRGET IQLTLASGKP LGEDVVLESG
AYYKLEITAD GSAELAIEGP SFFRAIWMNE IVINQIEIRP MAIDSIEFDK AGVAELSFIA
IKPGRHVLRI PGSTGESQSV TLSIQ
|
|---|
| |