| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0484 |
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| Symbol | |
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| ID | 5711400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 469158 |
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| End bp | 470129 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641266388 |
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| Product | 40-residue YVTN family beta-propeller repeat protein |
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| Protein accession | YP_001531833 |
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| Protein GI | 159043039 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.558778 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGA TCCTTCTTTC CGTCGCCATT CTGGCGCTGG GCACAGCGCA GGGCCTTGCC
GGCAGAGCCT TCGTCTCGAA TGAACGTGGC AACACGATCA CTGTAGTGAA TACCGACACG
TGGGAGGTCG AGACCGAGTT TTTCGCGGGA AACCGTCCCC GTGGCATCAC CGTCAGCCCG
GATGAAAAGG TGATCTATGT TTGCGCGTCG GACGACAACC TGATCCGCGT ATTCGACGCC
ACCACATACG AGGAATTGCC GAGCCTGCCG TCCGGCCCGG ATCCGGAGCT GTTCATTCTC
GAACCTTCAG GCAAGCGGCT CTACATCGCG AACGAGGACG ACAATCTGGT CACCGTTACC
GATACCGAGA CGCGTATGGT GCTGGCCGAG GTGCCCGTCG GCGTGGAGCC AGAGGGCATG
GGCATGAGCC CGGATGCCAA ATGGGTGGTC AACACCTCCG AGACCACCAA CATGGCGCAT
TTCATCTCGA CCGAGGACTA CAAGATCAAA CACAATATCT TGGTGGATCA GCGTCCGCGC
TACGCCCATT ACACCAGCGA CGGCACCCGG CTCTTCGTCA CCTCCGAGAT CGGCGGGACA
GTCTCGGTCA TGGATATCGA TGAAGACGGA GCGCCGACGG TTGTGGGCAA GATCAGCTTC
GAAGTGGCCG GGCTTCAGCC CGAATGGCTG CAACCGGTGG GCGCGCGGGT GACCAAGGAT
GGCTCACGTC TCTTCGTGGC GCTCGGACCT GCGAACAGGG TCGCTGTGGT CGACGCGCGC
AGCCTCGAAG TGCTCGACTA CATCCTCGTG GGTCAGCGGG TCTGGCAGCT CGATTTCACG
CCCGATGAAA AATACCTGCT GACCACCAAT GGCAATTCCA ACGACATCAC AGTGATCGAC
GTGGAAAAGG AACGCGCTAT CCGCTCCATC CAGGTTGGGC AACAGCCATG GGGCGTCGTG
ACCGTCAACT AA
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| Protein sequence | MKTILLSVAI LALGTAQGLA GRAFVSNERG NTITVVNTDT WEVETEFFAG NRPRGITVSP
DEKVIYVCAS DDNLIRVFDA TTYEELPSLP SGPDPELFIL EPSGKRLYIA NEDDNLVTVT
DTETRMVLAE VPVGVEPEGM GMSPDAKWVV NTSETTNMAH FISTEDYKIK HNILVDQRPR
YAHYTSDGTR LFVTSEIGGT VSVMDIDEDG APTVVGKISF EVAGLQPEWL QPVGARVTKD
GSRLFVALGP ANRVAVVDAR SLEVLDYILV GQRVWQLDFT PDEKYLLTTN GNSNDITVID
VEKERAIRSI QVGQQPWGVV TVN
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