| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0478 |
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| Symbol | |
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| ID | 5711394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 463273 |
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| End bp | 464121 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641266382 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_001531827 |
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| Protein GI | 159043033 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.648252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCAT GGGCTGATGT GCTATGCAGA TTGACCGTGA CCCTGTCGGT CGGGCTGGCA
ATTTCCTCCG GAGGGGTCGC GGCCCAAACC TCTGATCTGG TATCGACAAA CGCCCTGCGG
GTCTGCGCGG ATCCCGCGAA CCTGCCGATG TCCGCAAAGA CCGAGGATGG GTTCGAGAAC
AGGCTGGCGG AGTTAGTTGG ATCGAAACTG GAATTACCGG TCCAATACAC ATGGTATCCC
ATGGCCACGG GGTTTGTGCG TAACACGCTC AACGCCAAGA AATGCGATCT GGTGATTGGC
TATGCACAGG GCCATGAGCT GGTGCTGAAC ACCAATCATT ACTTCACGTC CGTCTATTCC
CTTATCGTTC CCGCCGAGGG CGATCTGGCC GGCGTGACCT CGCTCGATGA TCCGTCCCTG
CAGGGGCGGC GGATCGGGAT CGTCGCGGGC ACGCCGCCCT CGGCCCATCT GGCACGCAAC
GGGCTTGTGG GAAAAGCGAA GGCCTATAAC CTCGTGGTGG ATCGTCGCCA CGAGAGCCCT
GCCGTTGATA TGCTCAATGA TCTGGAGGCG GGCGACATTG ACGCCGCGAT CCTTTGGGGC
CCCATTGGCG GACCACTGGT CAAACAGCAC CACCCCAACC TCAAACTGAT CCCGCTGGTG
AACGAGACCT TGCCGCCGCG GCTGTTCTTT CGGATCACCA TGGGGGTCCG CCAGGGCGAA
AAGGTTTGGC AACGCAGGTT GAACTCCCTC ATCCGGCGGC ATCAGGACGA AATAAACGCC
GTGCTTTTCG AGGCGGGCGT GCCGCTGGTC ACTGATCTCG GCAAGGAAGT GATCGAGCCA
CCACAATGA
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| Protein sequence | MAAWADVLCR LTVTLSVGLA ISSGGVAAQT SDLVSTNALR VCADPANLPM SAKTEDGFEN
RLAELVGSKL ELPVQYTWYP MATGFVRNTL NAKKCDLVIG YAQGHELVLN TNHYFTSVYS
LIVPAEGDLA GVTSLDDPSL QGRRIGIVAG TPPSAHLARN GLVGKAKAYN LVVDRRHESP
AVDMLNDLEA GDIDAAILWG PIGGPLVKQH HPNLKLIPLV NETLPPRLFF RITMGVRQGE
KVWQRRLNSL IRRHQDEINA VLFEAGVPLV TDLGKEVIEP PQ
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