| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0454 |
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| Symbol | pqqE |
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| ID | 5711370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 440580 |
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| End bp | 441686 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641266358 |
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| Product | pyrroloquinoline quinone biosynthesis protein PqqE |
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| Protein accession | YP_001531803 |
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| Protein GI | 159043009 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR02109] coenzyme PQQ biosynthesis protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCCCC CGCCCCCCAT CGCGATGCTG GCCGAGCTGA CCTATCGCTG CCCGCTTTCC
TGCCCCTATT GCTCGAACCC GATCGAGATG GCCCGCAAGG AGGCTGAACT CGATACAGGC
ACCTGGGAGC GGGTGTTTCA GGAGGCGGCC GAGCTCGGCG TGCTACAGTT GCACCTTTCA
GGGGGGGAGC CCGTCTCACG GCGCGACATT GTCGATCTGG TGGCGGCCGC TCGCGCGGCG
GGCCTCTATA CCAACCTTAT CACCTCCGGC ATCGGCCTTA CCGAGCGGCG GCTGGCCGAC
CTGGATGCGG CTGGGCTCGA TCATATCCAG CTGTCTCTGC AAGGGACCGA CCCGGCGATG
GCCGACGAGA TCGGCGGCTA CAAGGGCGGT TTTGCACGCA AGATGCAGGT CGCGGAGTGG
ATCGGGGCCA TCGGCTTTCC GCTGACGCTC AACGCGGTCC TGCACCGGCG CAACCTCCAC
CAGCTGCCCC GCGCGTTGGA CATGGCGCTC GAGATGGGCG CGCGCCGGAT CGAGGTTGCC
ACGGTCCAGT TCCATGGCTG GGCGCTCAAG AACCGGGATG CGCTCATGCC CACCCGCGAC
CAGGCCCGCG AGGCCACCGC CATCGTCGCC GAGGCGCGTG CGCGCCTCAA GGGCAGGCTG
GTCATCGACT ACGTCCCCGC CGATTATCAC GAGGACTATC CGAAGCGGTG TATGGGTGGC
TGGGGCACGT CCGGGCTCAA CGTCACGCCG GATGGCACTG TCCTGCCCTG CCACGCGGCG
CACTCGATCC CTCATCTGAC CTTTGAGACG GTCTTGGACC GCAGCCTGTC GGACATCTGG
TACGAGGGCA TGGCCTTCAA CGCCTATCGC GGCACGGACT GGATGTCCGA ACCCTGTTCC
AGCTGCGAAC GCAAGACCGT CGATTTCGGC GGCTGCCGCT GTCAGGCCAT GGCGATCCTC
GGGGACGCCA ACGCGACGGA CCCGGTCTGC GTGAAATCCC CCCATCACGG AGCGCTCCAA
AGTCAGGCCG ACGCACATGC GGCTCGCGAT GACACGCCGC TGGTCTACCG TGTATCTCCG
GGCACAACGC CGGAGCCTGT GCAATAG
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| Protein sequence | MRPPPPIAML AELTYRCPLS CPYCSNPIEM ARKEAELDTG TWERVFQEAA ELGVLQLHLS
GGEPVSRRDI VDLVAAARAA GLYTNLITSG IGLTERRLAD LDAAGLDHIQ LSLQGTDPAM
ADEIGGYKGG FARKMQVAEW IGAIGFPLTL NAVLHRRNLH QLPRALDMAL EMGARRIEVA
TVQFHGWALK NRDALMPTRD QAREATAIVA EARARLKGRL VIDYVPADYH EDYPKRCMGG
WGTSGLNVTP DGTVLPCHAA HSIPHLTFET VLDRSLSDIW YEGMAFNAYR GTDWMSEPCS
SCERKTVDFG GCRCQAMAIL GDANATDPVC VKSPHHGALQ SQADAHAARD DTPLVYRVSP
GTTPEPVQ
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