| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0451 |
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| Symbol | pqqB |
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| ID | 5711367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 438663 |
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| End bp | 439556 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641266355 |
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| Product | pyrroloquinoline quinone biosynthesis protein PqqB |
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| Protein accession | YP_001531800 |
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| Protein GI | 159043006 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
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| TIGRFAM ID | [TIGR02108] coenzyme PQQ biosynthesis protein B |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTCC GCGCGCATAT TCTGGGGGCT GCTGCCGGAG GCGGGTTGCC CCAGTGGAAT
TGTGGTTGTG ACAACTGCAA CCTCGCAAGA TCCGGCACCA TCCCCCCACA GACCCAGTCC
TCCCTGGCCG TCACTGCAGA CGGCACGTCC TGGGCGATTC TCAACGCATC GCCCGACATT
CGCGGACAAC TTGCCGACAC ACCGGCCCTG CACCCGACGG GCTTGCGCGA TCTTCCGCTG
CGCGCGGTGC TGGTCACGAA TGGCGATATC GACCACGTGG CGGGCCTGCT GACCTTGCGC
GAAATGCAGC CATTCCGTCT CTTTGCAACG GCAGGTATCC ACGAGGTGCT GGCCGAAAAC
CCGATCTTCA ATGCGGTAAA CGCGACGGTC GTGCCGCGCG AGACCATCGC GCTCGATGCG
CCATTCGAGC TGGTGCCGGG TCTCATCGCC ACCCTGTTTC CCGTGCCCGG CAAGGTGCCG
CTTTACCTCG AGGGAGAGAC AGTGGAGACT GACTTGATCG GCGATCAGAC CGTGGGCGTG
CGTCTTCAGG CCCTCGACTC CACGGCCTAC TACATCCCGG GCTGCGCGTT GCTGACCGAC
GACCTTCGCG CCCGGCTGGA CGGGGCCGAC ACGCTCTTTT TCGACGGCAC ACTCTGGGCG
GATGATGAAA TGGTACGGGC GGGTCTCGGC AAAAAGACCG GCAAGCGCAT GGGCCATATG
TCCATGAGCG GCCCAGACGG GTCCATCGCC GCGTTCGAGG GCCTGTCCAT CCGGCAGAAG
ATCTACGTCC ACATGAATAA CACGAACCCG GTGCTCCGCC CCAGCTCGGC CGAGAAGGCG
CAAGCAGAGG CCGCGGGCTG GATCATCGGG CAAGATGGTA TGGAGGTGTC CTGA
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| Protein sequence | MAFRAHILGA AAGGGLPQWN CGCDNCNLAR SGTIPPQTQS SLAVTADGTS WAILNASPDI
RGQLADTPAL HPTGLRDLPL RAVLVTNGDI DHVAGLLTLR EMQPFRLFAT AGIHEVLAEN
PIFNAVNATV VPRETIALDA PFELVPGLIA TLFPVPGKVP LYLEGETVET DLIGDQTVGV
RLQALDSTAY YIPGCALLTD DLRARLDGAD TLFFDGTLWA DDEMVRAGLG KKTGKRMGHM
SMSGPDGSIA AFEGLSIRQK IYVHMNNTNP VLRPSSAEKA QAEAAGWIIG QDGMEVS
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