| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0447 |
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| Symbol | |
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| ID | 5711363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 434981 |
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| End bp | 435769 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641266351 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001531796 |
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| Protein GI | 159043002 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00494896 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCTC GCGCCCGCTC CCTTCTCCTT CACGGCTCGG GATCCATGGC ACCTGAACCC
CGCGCCGGGC TTTTGCACGG GCCCGTCGGA CGACATGTTC CGACATTGAT CGACCTCTTC
CTGCGCGTCC AGCCGCATCC GCAAATCCAC ACCGCGCGCC GGGGCAAGGC CGTCATCCGC
GAGGACGACT TCGCGGATCA TGCGATGCTT CTGCTGGAGG GATGGGTCGC CTTCTCGAAA
ATGCTGCCCG ATGGCGAATC GCAGATCATC GACATCCTTC TGCCCGGGGA TTTTGCGCTG
ATTGGCGCTG CCAATGCACC GCTGGCCGCC TTTTCGGTCG AAACCCTGAG CGACGCGCGC
TTCATCAATA TCGGGCCGGG GCGAGTCAAC GGCCCCGAGC CGGAGATGGC GAGGCTGCGC
GAACTGATGG CCGCCGAAAT TGTCCGGATG CAATCGCGCA CATCCGAGTT GCTATTGCGG
GTGGGAAAGG GCAGTGCCGC GAACCGTATC GCCTATGCCT TGCTGGAATT CTTCGTCCGC
CTCGAAGCGG TCGGGATGAC CAGCGGCACC CGGTTCGCCT TTCCCATGAC GCAGCACAAG
CTAGGCGAAT TCACTGGCAT GAGCAACGTC CATGTCAACC GGACGCTGCG GCGCTTCGAA
CGCGAGGGAA TCGTGGCCTA TCCGGCCCCG CCCGAGATCG ACCTGTGCGA CATCGACGCC
CTATGCGCGC TGGCCGGTCT CGATCTGGCG AGTTTTCGCA ACGAGATCAT CGCGCGGCGC
GCGCCCTGA
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| Protein sequence | MTSRARSLLL HGSGSMAPEP RAGLLHGPVG RHVPTLIDLF LRVQPHPQIH TARRGKAVIR
EDDFADHAML LLEGWVAFSK MLPDGESQII DILLPGDFAL IGAANAPLAA FSVETLSDAR
FINIGPGRVN GPEPEMARLR ELMAAEIVRM QSRTSELLLR VGKGSAANRI AYALLEFFVR
LEAVGMTSGT RFAFPMTQHK LGEFTGMSNV HVNRTLRRFE REGIVAYPAP PEIDLCDIDA
LCALAGLDLA SFRNEIIARR AP
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