Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0445 |
Symbol | |
ID | 5711361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 434046 |
End bp | 434438 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641266349 |
Product | hypothetical protein |
Protein accession | YP_001531794 |
Protein GI | 159043000 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00422073 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGAAGC ATCTTCGGAC CTATCGATTG CCAAGCGATT TGGCCGTGAC CGAGCAGGCG ACGGCGCTGG TCCGGTCGCT CGGAACCATC GCGGTGCTCC ACCGGGGCAT CGAAACCTCG CCTGACCGCA TGAGCGATGC GGACCTGGTG CGGGCAACGT CCTTCGGGTG TGTGCATACC CTCATGGTGG ATATCGACAG CATGGTTGCC AGCACGGTGT ACGAGACGAC AGGGGCTGTC AGCTGCCGGC CAGAGGGCAT GGTGGGCGAT TACGGCGTGC GGGACGAGAT TGCCGGCCTC GCCTTGCGGA CCGGCGCGCG GGTTCTTGCG GTGCGCGAAA AGGAGATTCC TAGCGGCAAA CTTATCGCGG CAATCCTGCG ATGCTCGGTT TGA
|
Protein sequence | MPKHLRTYRL PSDLAVTEQA TALVRSLGTI AVLHRGIETS PDRMSDADLV RATSFGCVHT LMVDIDSMVA STVYETTGAV SCRPEGMVGD YGVRDEIAGL ALRTGARVLA VREKEIPSGK LIAAILRCSV
|
| |