Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0440 |
Symbol | atpE1 |
ID | 5711356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 430175 |
End bp | 430465 |
Gene Length | 291 bp |
Protein Length | 96 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641266344 |
Product | F0F1 ATP synthase subunit C |
Protein accession | YP_001531789 |
Protein GI | 159042995 |
COG category | [C] Energy production and conversion |
COG ID | [COG0636] F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K |
TIGRFAM ID | [TIGR01260] ATP synthase, F0 subunit c [TIGR03322] alternate F1F0 ATPase, F0 subunit C |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.100541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATC TTGCCATCAT TGCCGCCGTG TCCATCTTCA CCGCCGGGTT GACCATCGCC ATCGGCGCCA TCGGCCCGGC GCTTGGCGAG GGGCGCGCGG CGTCGACCGC CCTGAGCGCC ATCGCGCAGC AGCCCGACGC GGCCTCGACC CTGTCGCGGA CATTGTTCGT CAGCCTTGCG ATGATCGAAT CCACCGCGAT CTACTGCTTC GTGGTGGCGA TGATCCTGAT CTTCGCCAAC CCGTTCTGGG AGGCCGCGCT GGAGGCTGCC ACCGTCGGCG CCGGAGGCTA G
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Protein sequence | MTDLAIIAAV SIFTAGLTIA IGAIGPALGE GRAASTALSA IAQQPDAAST LSRTLFVSLA MIESTAIYCF VVAMILIFAN PFWEAALEAA TVGAGG
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