| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0428 |
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| Symbol | phaC |
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| ID | 5711344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 419269 |
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| End bp | 421152 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641266332 |
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| Product | poly(3-hydroxyalkanoate) polymerase |
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| Protein accession | YP_001531777 |
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| Protein GI | 159042983 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAC GGCAGACCAT TTCCGCACCG ACGGACGACA TCGATCCGCG CGCGGACCAT
CGGGGCGGCC CGGTCGCAGC ACCTGTACCC TCGACACCCC CGGCACGGGC CGCCGACGGT
CCGGAGGTCG CGCCGGAGCT TGGCCCGCTC TGCCCTGCCG AGAAGCCGGA CAGGCACGGG
CTGTCGATGC TCGACCAGGC GACCAAGGCA CATCTGGCGC GGCTCACGCA GGGTATCTCG
CCCTTCGGGC TGACCTCCAG TTTCTTCGAT TGGGGGATGC ATCTGGCCGC CTCGCCGGGC
AAGCAGATGC AACTGGCCGA CAAGGCGCAG CGCAAGGCGG CGAAGCTGGC AATGGCGGCG
AGCCGGATGG CCCTGGGCAA GTCCGGTGCC CCCTGCATCG ATCCGCTGAT CTATGACAAG
CGTTTCGTGG CCCCGGAATG GCAACGCTGG CCCCATAACC TGATCTACCA GAGTTTCCTG
ATGACCCAGC AGTGGTGGTA CAACGCCACC AACGATATAG ACGGTCTGTC GCGGTGCGAC
GAGCAGGTGG TGTCCTTCGT CATGCGCCAG CTGCTCGACA TGATGTCGCC GGCGAACGGT
CTGTGGACCA ACCCGGAGGT TCTGGCCGAA ACCACGCGGA CCTTCGGGGC CAATCTGGTG
CAGGGGACCC AGAACCTGAT CGAGGACATG GAACGGGCGC TGGCGGGCAA GCCGCCCGTG
GGCGCGGAAG ACTACCTGCC CGGGCGCGAG GTCGCGGTGA CGCCGGGCAA GGTCGTCCAT
CGCAGCCACC TGTTCGAGCT GATCCAGTAC GCGCCGCAGA CCGAGACGGT TGCGGCCGAG
CCCATCCTGA TCGTGCCGGC CTGGATCATG AAATACTATA TTCTCGACCT GTCGCCGCAT
AACTCGCTGG TCCGCTACCT GGTGGAGCAG GGCTTCACCG TCTTCATGAT CTCGTGGCGC
AACCCGGATG CGGGGGACCG CGATCTGGGC ATGGAGGATT ATCTGGCCGC GCTCGATACG
GCGCTCGACG AGATCGGTGC GATCGTGCCC GAAACGGGTG TGCACGGTGT CGGCTACTGC
TTGGGCGGTA CGCTGTTGTC GGTGAAGGCG GCGCTAATGG CGCGCGACGG GGACGACCGG
CTGAAGACGC TGAGCCTGCT GGCGACCCAG ACCGATTTCG AAGACCCCGG CGAGTTGCAA
CTGTTCATCA GCGAGAGCCA GCTGTCCTAT CTCGACCACA TGATGTGGGA CCAGGGGTAT
CTGGACACCA AGCAGATGGC GGGGGCGTTC CAGCTTCTGC GGTCGCGCGA CCTGATCTGG
TCGCGCTATG TCCACGAGTA CCTGATGGGC CGCCGTCAGC CGATGTTCGA CCTGATGGCG
TGGAACGCGG ATGCCACGCG CATGCCCTAC CGGATGCACA GCGAGTATCT GCGCAGCATG
TTCCTCGACA ACCAACTGGC GCAGGGGCAA TACCGGGTCG GCGGCAGGCC GGTGGCGCTC
AGCGATATCC GGGCGCCGGT GTTCTGCGTC TCGACCACGG GCGATCACGT CGCGCCGTGG
CAGTCGGTCT ACAAGCTGCA CCTGCTGGCC GATACCGACA TCACCTTCGT GCTGACATCG
GGCGGGCACA ATGCCGGCAT CGTCAGCGAA CCGGGGCACA AGGGCCGCAG CTATCAGATC
CGGACCCTTC CGGACGCCGA GCATTACATC CCGCCCGAGG ACTGGCGCGC GCAGACGCAG
GTGCAGGACG GGTCCTGGTG GCCTGAGCAT GTCGCCTGGC TGCGGGCGCA TGGCGCGCCA
GAAGAGGGGC CGCCGCCGCC CATGGGGCGC AAGGGTGCGG GCGATCTGCG AGACGCGCCG
GGCGCCTATG TCCTGCAACC CTGA
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| Protein sequence | MTKRQTISAP TDDIDPRADH RGGPVAAPVP STPPARAADG PEVAPELGPL CPAEKPDRHG
LSMLDQATKA HLARLTQGIS PFGLTSSFFD WGMHLAASPG KQMQLADKAQ RKAAKLAMAA
SRMALGKSGA PCIDPLIYDK RFVAPEWQRW PHNLIYQSFL MTQQWWYNAT NDIDGLSRCD
EQVVSFVMRQ LLDMMSPANG LWTNPEVLAE TTRTFGANLV QGTQNLIEDM ERALAGKPPV
GAEDYLPGRE VAVTPGKVVH RSHLFELIQY APQTETVAAE PILIVPAWIM KYYILDLSPH
NSLVRYLVEQ GFTVFMISWR NPDAGDRDLG MEDYLAALDT ALDEIGAIVP ETGVHGVGYC
LGGTLLSVKA ALMARDGDDR LKTLSLLATQ TDFEDPGELQ LFISESQLSY LDHMMWDQGY
LDTKQMAGAF QLLRSRDLIW SRYVHEYLMG RRQPMFDLMA WNADATRMPY RMHSEYLRSM
FLDNQLAQGQ YRVGGRPVAL SDIRAPVFCV STTGDHVAPW QSVYKLHLLA DTDITFVLTS
GGHNAGIVSE PGHKGRSYQI RTLPDAEHYI PPEDWRAQTQ VQDGSWWPEH VAWLRAHGAP
EEGPPPPMGR KGAGDLRDAP GAYVLQP
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