Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0423 |
Symbol | pap |
ID | 5711339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 415763 |
End bp | 416488 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641266328 |
Product | phosphoesterase PA-phosphatase related |
Protein accession | YP_001531773 |
Protein GI | 159042979 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0671] Membrane-associated phospholipid phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAACA AATCGCACTT GCACTTGCTG CGCGACGTCA GGCCGAACCC TCAGATCACA GGCCTTCTAA TCGTGGCCGC GCTGCTTTGG GCCTTCGCAC GGATCACGAA TGCCGTGGTC GGCGGCGAAA CCCGGGCCTT CGATACGTCT CTGCTGATCG CGCTGCGCAA TCCTGCGGAC CTCACCGACC CGCTGGGGCC CATCTGGATC GAAGAGCTGG GGCGCGATCT GTCCGCTCTG GGCGGGACGT TCGTGTTGAG CTTCCTGACA TTGTCGGTCG CGGGTCTCTT CTGGTTGCAG CGGCGGCGGA TCACCTCGGC ATTCCTGTTG CTGGCGGTGA CCACGGGCGT CGGCCTGAGC CAGCTGCTCA AGGCCGGGTT CGACCGTCCG CGGCCCGATC TCGTGTCGCA GGAAACAGCC ATATACACCG CCAGTTTCCC CAGCGGTCAC TCGATGATGG CAGCGGTCGT CTACCTGACG TTGGCCGTGC TTGCGGCGCG GACGCTCAAG AGGCGTCGGG AAAAGGGATA TGTGGTGTCG CTCGCGATCC TGATCGTCCT CGGCGTCGGG ATCAGCCGGG TGTATCTGGG GGTGCATTGG CCCACGGATG TGCTGGCGGC GTGGATCATC GGCGCAGGAT GGGCGCTGTT TTGCGGAATC TTTGCGCGGT TTCTGGACCG GGCCGGGCCG CAGGATCGTT CGTCACGCCC GGGGCCCGAC ACCTGA
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Protein sequence | MANKSHLHLL RDVRPNPQIT GLLIVAALLW AFARITNAVV GGETRAFDTS LLIALRNPAD LTDPLGPIWI EELGRDLSAL GGTFVLSFLT LSVAGLFWLQ RRRITSAFLL LAVTTGVGLS QLLKAGFDRP RPDLVSQETA IYTASFPSGH SMMAAVVYLT LAVLAARTLK RRREKGYVVS LAILIVLGVG ISRVYLGVHW PTDVLAAWII GAGWALFCGI FARFLDRAGP QDRSSRPGPD T
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