Gene Dshi_0423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0423 
Symbolpap 
ID5711339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp415763 
End bp416488 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content65% 
IMG OID641266328 
Productphosphoesterase PA-phosphatase related 
Protein accessionYP_001531773 
Protein GI159042979 
COG category[I] Lipid transport and metabolism 
COG ID[COG0671] Membrane-associated phospholipid phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACA AATCGCACTT GCACTTGCTG CGCGACGTCA GGCCGAACCC TCAGATCACA 
GGCCTTCTAA TCGTGGCCGC GCTGCTTTGG GCCTTCGCAC GGATCACGAA TGCCGTGGTC
GGCGGCGAAA CCCGGGCCTT CGATACGTCT CTGCTGATCG CGCTGCGCAA TCCTGCGGAC
CTCACCGACC CGCTGGGGCC CATCTGGATC GAAGAGCTGG GGCGCGATCT GTCCGCTCTG
GGCGGGACGT TCGTGTTGAG CTTCCTGACA TTGTCGGTCG CGGGTCTCTT CTGGTTGCAG
CGGCGGCGGA TCACCTCGGC ATTCCTGTTG CTGGCGGTGA CCACGGGCGT CGGCCTGAGC
CAGCTGCTCA AGGCCGGGTT CGACCGTCCG CGGCCCGATC TCGTGTCGCA GGAAACAGCC
ATATACACCG CCAGTTTCCC CAGCGGTCAC TCGATGATGG CAGCGGTCGT CTACCTGACG
TTGGCCGTGC TTGCGGCGCG GACGCTCAAG AGGCGTCGGG AAAAGGGATA TGTGGTGTCG
CTCGCGATCC TGATCGTCCT CGGCGTCGGG ATCAGCCGGG TGTATCTGGG GGTGCATTGG
CCCACGGATG TGCTGGCGGC GTGGATCATC GGCGCAGGAT GGGCGCTGTT TTGCGGAATC
TTTGCGCGGT TTCTGGACCG GGCCGGGCCG CAGGATCGTT CGTCACGCCC GGGGCCCGAC
ACCTGA
 
Protein sequence
MANKSHLHLL RDVRPNPQIT GLLIVAALLW AFARITNAVV GGETRAFDTS LLIALRNPAD 
LTDPLGPIWI EELGRDLSAL GGTFVLSFLT LSVAGLFWLQ RRRITSAFLL LAVTTGVGLS
QLLKAGFDRP RPDLVSQETA IYTASFPSGH SMMAAVVYLT LAVLAARTLK RRREKGYVVS
LAILIVLGVG ISRVYLGVHW PTDVLAAWII GAGWALFCGI FARFLDRAGP QDRSSRPGPD
T