| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0421 |
|---|
| Symbol | |
|---|
| ID | 5711337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 413435 |
|---|
| End bp | 414979 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641266326 |
|---|
| Product | phospholipase D/Transphosphatidylase |
|---|
| Protein accession | YP_001531771 |
|---|
| Protein GI | 159042977 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCCGA TCGAGATACG GGTTCTGCTG TTTGCGGTCG GGGCGCTGGT GTTGGCGGTC
CTGGTCGCTC GGCTGGTCTT TCCGGCGCCG ACGCCCGAGC CGCAGAAGAC GGGGCGCGCC
CTTCCCCCCG CAGCCGAAGG TGTGCTGACC GAAGCGATGA GCACGCGGGC CGCGCAGCAC
CCGGGTCAGA GCGGCATCGC CGCGCTATCG GACGGCATGG AGGCCTATGT GGCGCGCATG
GTGCTCGCCA ACGCGGCCGC TTCGTCGATC GACGCGCAAT ACTACATCTG GCGCAACGAC
ATGACCGGGC ATCTGTTTCT GCAGGCGCTG TGGCGGGCGG CCGAACGGGG TGTGCGGGTG
CGCCTTTTGC TCGACGATAA CGGCATCCAT GATCTCGATG GCATGCTGGC CACGCTGGAC
TCGCATCCGA ATATCGAGGT GCGGCTGTTC AACCCTTTCG TCCTGCGTCG GTTCAAGCGG
CTGTCCTACG CTTTCGACCT GTTCCGGCTG AACCACCGGA TGCACAACAA GGCATTCACC
GTCGATGGCC GCGTCAGCAT TTTGGGCGGG CGCAACATCG GAGACGAGTA TTTCGGGACC
GGCGAAATCC CGTTGCAGAT GGATCTGGAC GTTCTGGCAG TGGGCGCGGT CGTCCCGGAG
ATCTCGGCCG ATTTCGATCG CTACTGGAAT GCCGACGCCA CCCATTCGGC GGCGCGCATC
CTGCACAGTC GCGCGGATCC GGAGGCGATG GCGGCGCAGT TCGACCGGGT CGAGAACGAT
CCGCGTCATG CGACCTACCG CGCGCAGCTC GAACAATCCG ACCTGGTGTC CAGGCTGGCC
AAGGGCGGGC TTGCGCTGGA CTGGACGAAC GCCACCCTGA TCAGCGACGA TCCGGCCCGG
GTGTTCGACC GTGTGCCGCG GTCGAAACGG TTTACCGCGC GTCTGTTGGA TGCAATCGGG
CCGATCGAGC ACAGGTTCGA TGGGGTCACG CCCTATTTCG TGCCGGGCGA GGCCGGGGTT
GCGGCCTTCA CCGCCATGGT GCGCAACGGC GTCACGGTCC GCATGCTGAC CAATTCGCTG
GAGGCGACCA ACATGCTGCC GGTTCATGCC GGTTACAGCA AACGCCGCGC GCCCCTGTTA
CGCGTGGGCG TCGGTCTGTT CGAATTGCGC GCCCAGGCGG CCGGGGCCTC CGAGCGCGAC
AGGCTGGGCC CGCTGGGTTC ATCGGGTTCG AACCTGCATG CCAAGACCTT CGCAGTGGAC
GGGGCGCGCA TTTTCATAGG GTCGTTCAAT TTCGATCCCA GATCGGCCTT GCTCAATACC
GAAATGGGGC TGGTGATCGA GAGCGAGAGG ATGGCGCAGG TACTGCACGA GGCCTTCGAC
CGGGGGCTGG GCGGCATGGC CTGGCAGGTG AAGCTGGAGC GCGGCAAACC GGTCTGGATC
GACGCCGAGA AGGCAATCCG CACCGATGAC GAGCCCGGCA CGACCCTGGT CAGACGGATC
GCCCTGCGGG TGATCGGATC GCTGCCGGTC GAATGGTTGC TGTGA
|
|---|
| Protein sequence | MVPIEIRVLL FAVGALVLAV LVARLVFPAP TPEPQKTGRA LPPAAEGVLT EAMSTRAAQH
PGQSGIAALS DGMEAYVARM VLANAAASSI DAQYYIWRND MTGHLFLQAL WRAAERGVRV
RLLLDDNGIH DLDGMLATLD SHPNIEVRLF NPFVLRRFKR LSYAFDLFRL NHRMHNKAFT
VDGRVSILGG RNIGDEYFGT GEIPLQMDLD VLAVGAVVPE ISADFDRYWN ADATHSAARI
LHSRADPEAM AAQFDRVEND PRHATYRAQL EQSDLVSRLA KGGLALDWTN ATLISDDPAR
VFDRVPRSKR FTARLLDAIG PIEHRFDGVT PYFVPGEAGV AAFTAMVRNG VTVRMLTNSL
EATNMLPVHA GYSKRRAPLL RVGVGLFELR AQAAGASERD RLGPLGSSGS NLHAKTFAVD
GARIFIGSFN FDPRSALLNT EMGLVIESER MAQVLHEAFD RGLGGMAWQV KLERGKPVWI
DAEKAIRTDD EPGTTLVRRI ALRVIGSLPV EWLL
|
|---|
| |