| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0412 |
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| Symbol | fas |
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| ID | 5711328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 406254 |
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| End bp | 407786 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641266317 |
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| Product | beta-Ig-H3/fasciclin |
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| Protein accession | YP_001531762 |
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| Protein GI | 159042968 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.821212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGAT TTTCCACGAA GCTGCCGAAT ATCGTGGCGA TTGCCGCCGG GTCCGATGAT
TTCAACCTGC TGGTGAAGGC GCTCACGGCA GCCGACCTCG TTGGCACGGT GCAGGGACTG
AAGGACATCA CCGTCTTCGC GCCGACGGAC GCGGCCTTCA CCCAACTGGC GGTCGATCTG
GGCTTTGCCG GCGACACCGG GGACGAGGAT GCAGTGTTCG CCAGCCTTGT CGCCAGCCTG
ACCGAGTTGG GCGGGGGCGA TCCGATCCCT CTGCTGACAG ATGTGCTGCT CTATCACGTC
TCGGCGGGCG CCAAGACGGC GGCGGAGATC GATGCGCTGG AGGTGGTCGG GACCTTCTTG
CCCGGGGCCA CCTTCGGATC GGAGGGCACC GAACTGGTCG ATAACGAGCC GGATGTGGCG
AACCCGAACA TCGTGATCCC GGACATCGCG GCCTCAAACG GAACGATCCA GGCGATCGAC
CGGGTTCTCT TGCCGATCGA CATTCCGGGC AATGAGCCTC CCGCGCCGAC CGAGACCCTT
GCGGGAATCG TCGCGGCCAG TGGCGGGGTT TTCGACGGGG ACAAATCGGA TTTCGACCTT
CTGCTGAACG CGGTGCAGGC CGCGGGGCTG GTCGGGGCGC TGGACGATCC GGAGGCCGAC
CTGACCGTGT TTGCGCCCAA TGACGCGGCT TTCATCGGGT TGGCGCAGAC GCTGGGCTTT
GACGGGGAGG ACGAGGGCGC GGCCTTCGCC CATATCGTCG AGGCGCTGAC CCTGTTGTCG
GGGGGCGGGG ATCCGATCCC GCTGTTGCAG GATATCCTGC TCTACCACGT GGTGCCCGAA
GCGCTGGGGT CGGACGCGGT GCTGTCGGCC GAGAGCATTC CGACCCTTCT GGGTGCACCT
CTGGGCGTGG ACGGGGTGAG CCTCGTCGAC GCGGACCCTG ATATCGGCGA TCCGGCGCTG
ATCGAAACCG ATATCGCGGC CACGAACGGG ATCGCCCATG TGCTCGACGG GGTGCTCTTG
CCGGCGGATA TCCTGAACGG GGACGGCGGG CGCGGGCGCG TCGATTTCGA GATCGGAGAC
GCGGGCAACG AGCGCTTCTT CACCGGGGCG AATACGGATT TCGTCTCGGG GCTTGGTGGA
AATGACGTGA TCCGGCTGGG AGCGGGCGAT GATGTCGGCC TTGGCGGTGC GGGCAACGAC
ACGCTGCAGG GTGGTCGGGG GGCCGACACC CTCGATGGCG GGGCCGGGCG CGATGTGCTG
AAAGGAGGCC TTGGGGATGA CCTGCTCACC GGCGGCGCGG ATGCGGATGT GTTCCTGTTC
AATGGCTTCA GCGGTGCCGA CACGATCACT GATTTCTCCC TGGGCGAAGA TCTGCTCCAG
ATCCGGGCGC GCGGCATCGA CGATTATGGC GACCTCGCCC ATCGCATCAG TGACAGCGAC
GCGGGCGCGG TGATCGCCTT CGGCGGTACC GAGATCACTC TGGCCGGGAT CGGTGCCGAT
GCCCTGACCG CCAGCGATTT CCAGTTCATC TGA
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| Protein sequence | MTRFSTKLPN IVAIAAGSDD FNLLVKALTA ADLVGTVQGL KDITVFAPTD AAFTQLAVDL
GFAGDTGDED AVFASLVASL TELGGGDPIP LLTDVLLYHV SAGAKTAAEI DALEVVGTFL
PGATFGSEGT ELVDNEPDVA NPNIVIPDIA ASNGTIQAID RVLLPIDIPG NEPPAPTETL
AGIVAASGGV FDGDKSDFDL LLNAVQAAGL VGALDDPEAD LTVFAPNDAA FIGLAQTLGF
DGEDEGAAFA HIVEALTLLS GGGDPIPLLQ DILLYHVVPE ALGSDAVLSA ESIPTLLGAP
LGVDGVSLVD ADPDIGDPAL IETDIAATNG IAHVLDGVLL PADILNGDGG RGRVDFEIGD
AGNERFFTGA NTDFVSGLGG NDVIRLGAGD DVGLGGAGND TLQGGRGADT LDGGAGRDVL
KGGLGDDLLT GGADADVFLF NGFSGADTIT DFSLGEDLLQ IRARGIDDYG DLAHRISDSD
AGAVIAFGGT EITLAGIGAD ALTASDFQFI
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