| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0400 |
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| Symbol | |
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| ID | 5711316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 391798 |
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| End bp | 395037 |
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| Gene Length | 3240 bp |
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| Protein Length | 1079 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641266305 |
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| Product | CRISPR-associated protein |
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| Protein accession | YP_001531750 |
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| Protein GI | 159042956 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3513] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01865] CRISPR-associated protein, Csn1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.519358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGG GCCTTGACAT AGGAACCAGC TCAATCGGCT GGTGGCTGTA CGAAACCGAC
GGCGCCGGGT CGGATGCCCG CATAACCGGT GTCGTGGATG GGGGCGTGCG TATCTTCTCC
GACGGGCGCG ATCCGAAATC CGGTGCATCG CTGGCCGTGG ACCGTCGGGC CGCCCGTGCC
ATGCGCCGCC GCCGCGACCG GTATCTGCGT CGGCGCGCCA CCCTGATGAA AGTGCTTGCC
GAGACAGGCC TGATGCCCGC GGACCCGGCC GAGGCGAAGG CGCTGGAAGC CCTTGATCCC
TTCGCCCTGC GGGCCGCCGG GCTGGACGAA CCCCTGCCCT TGCCCCATCT CGGTCGCGCG
CTGTTTCACC TCAACCAGCG GCGGGGCTTC AAGTCGAACC GCAAGACCGA TCGGGGCGAC
AACGAAAGCG GCAAGATCAA GGACGCGACC GCGCGGCTCG ACATGGAGAT GATGGCCAAC
GGCGCCCGCA CCTATGGCGA GTTCCTGCAC AAGCGCCGGC AGAAGGCGAC CGATCCGCGC
CATGTGCCCA GCGTGCGCAC CCGCCTGTCG ATTGCCAATC GCGGTGGGCC GGATGGCAAG
GAAGAAGCCG GGTATGATTT CTACCCGGAC CGGCGGCACC TGGAGGAGGA GTTTCACAAG
CTCTGGGCCG CGCAGGGGGC CCATCACCCG GAACTGACCG AGACCCTGCG CGATCTGCTG
TTCGAAAAGA TCTTCTTTCA GCGGCCCCTG AAAGAACCCG AGGTCGGGCT TTGCCTCTTC
TCCGGCCATC ACGGGGTTCC GCCGAAAGAC CCCCGCTTGC CCAAGGCGCA CCCCCTGACA
CAGCGCCGGG TGCTCTACGA GACAGTCAAC CAGCTACGTG TCACGGCGGA CGGGCGCGAG
GCTCGTCCCC TGACGCGGGA AGAGCGCGAC CAGGTCATCC ACGCGCTCGA CAACAAGAAG
CCGACGAAAT CGCTTTCGTC GATGGTCCTG AAACTGCCCG CGCTGGCGAA GGTTCTGAAA
CTCCGCGATG GTGAGCGGTT CACCCTGGAA ACCGGCGTGC GAGACGCCAT CGCCTGCGAC
CCGTTGCGCG CCAGCCCTGC CCATCCGGAC CGCTTCGGCC CGCGCTGGTC CATCCTTGAT
GCCGATGCCC AATGGGAGGT GATCTCGCGC ATCCGCCGAG TGCAGAGCGA TGCCGAACAT
GCCGCCTTGG TGGATTGGCT GACCGAGGCA CACGGGCTCG ACCGCGCGCA TGCTGAGGCG
ACGGCCCATG CCCCCCTGCC CGATGGCTAC GGACGGCTGG GCCTGACCGC GACGACCCGT
ATCCTCTACC AGCTTACGGC GGACGTGGTG ACCTACGCCG ATGCGGTCAA GGCCTGCGGC
TGGCACCATT CCGACGGGCG GACCGGCGAA TGCTTCGACC GCCTGCCCTA TTACGGCGAA
GTGCTCGAAC GCCACGTCAT TCCCGGCAGC TACCACCCCG ACGACGACGA CATCACGCGG
TTCGGCCGGA TCACCAATCC GACGGTTCAT ATTGGCCTGA ACCAGCTTCG CCGCCTCGTG
AACAGGATCA TTGAAACCCA TGGCAAGCCC CATCAAATCG TCGTGGAGCT TGCCCGCGAT
CTCAAGAAGT CCGAAGAGCA GAAGCGCGCC GACATCAAGC GTATCCGCGA CACGACCGAG
GCGGCGAAGA AGCGGAGCGA AAAGCTCGAA GAGCTGGAGA TCGAAGACAA TGGCCGCAAC
CGGATGCTCC TGCGGCTGTG GGAGGATCTG AACCCCGACG ATGCGATGCG CCGGTTCTGC
CCCTACACGG GCACGCGTAT CTCGGCCGCC ATGATTTTCG ACGGCAGCTG CGACGTGGAT
CACATCCTGC CCTATTCGCG CACGCTGGAC GACAGTTTCC CCAACCGGAC GCTCTGCCTG
CGCGAAGCCA ACCGGCAGAA GCGCAACCAG ACCCCATGGC AGGCCTGGGG CGATACCCCG
CACTGGCACG CCATCGCCGC CAACCTGAAG AACCTGCCCG AGAACAAGCG CTGGCGTTTC
GCCCCGGATG CTATGACGCG GTTCGAGGGC GAAAACGGGT TCCTCGATCG GGCGCTAAAG
GACACGCAAT ACCTCGCCCG GATCTCTCGC AGCTACCTCG ACACGCTCTT CACCAAGGGT
GGGCACGTCT GGGTGGTGCC TGGTCGGTTT ACTGAAATGC TCCGTAGACA CTGGGGCCTG
AACTCTCTGC TTAGCGATGC CGGGCGCGGC GCGGTAAAGG CCAAGAACCG AACCGACCAC
CGCCATCACG CCATCGATGC CGCCGTGATC GCCGCAACCG ACCCTGGCCT GCTCAACCGG
ATCAGCCGCG CTGCGGGTCA GGGCGAGGCA GCCGGCCAGT CCGCGGAACT GATCGCCCGG
GACACACCCC CGCCCTGGGA AGGCTTCCGC GACGACCTGC GCGTCCGGCT CGATCGGATC
ATCGTCAGCC ACCGCGCGGA TCACGGGCGC ATCGACCACG CGGCCCGCAA ACAGGGCCGG
GACAGCACCG CGGGGCAATT GCACCAGGAG ACAGCCTATT CCATCGTCGA TGATATCCAC
GTTGCCAGCC GGACCGATCT TCTGAGCTTG AAACCCGCGC AGCTGCTGGA TGAGCCGGGC
CGAAGCGGCC AGGTGCGCGA CCCGCAGTTG CGAAAGGCCT TGCGCGTGGC GACTGGCGGC
AAGACCGGCA AGGATTTCGA GAACGCCCTG CGCTACTTCG CGTCCAAGCC CGGCCCATAT
CAGGCCATCC GCCGGGTGCG CATCATCAAG CCGCTGCAAG CGCAGGCGCG CGTTCCCGTG
CCCGCGCAGG ACCCGATCAA GGCCTACCAG GGCGGCAGCA ACCACCTGTT CGAGATCTGG
CGACTTCCGG ACGGAGAGAT CGAAGCACAG GTCATCACGA GTTTCGAGGC CCATACCCTC
GAAGGCGAGA AGCGTCCTCA CCCTGCGGCC AAGCGTCTTT TGCGTGTGCA CAAGGGGGAC
ATGGTGGCTT TGGAACGGGA CGGTCGACGG GTCGTCGGAC ATGTCCAAAA AATGGACATT
GCAAACGGCT TGTTTATTGT CCCGCACAAT GAGGCGAACG CCGATACACG CAACAACGAC
AAATCGGACC CGTTCAAATG GATTCAAATC GGCGCGCGGC CCGCGATCGC ATCCGGAATT
CGCCGCGTAT CCGTCGATGA AATCGGCCGC CTTCGCGACG GGGGAACCAG GCCCATATAG
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| Protein sequence | MRLGLDIGTS SIGWWLYETD GAGSDARITG VVDGGVRIFS DGRDPKSGAS LAVDRRAARA
MRRRRDRYLR RRATLMKVLA ETGLMPADPA EAKALEALDP FALRAAGLDE PLPLPHLGRA
LFHLNQRRGF KSNRKTDRGD NESGKIKDAT ARLDMEMMAN GARTYGEFLH KRRQKATDPR
HVPSVRTRLS IANRGGPDGK EEAGYDFYPD RRHLEEEFHK LWAAQGAHHP ELTETLRDLL
FEKIFFQRPL KEPEVGLCLF SGHHGVPPKD PRLPKAHPLT QRRVLYETVN QLRVTADGRE
ARPLTREERD QVIHALDNKK PTKSLSSMVL KLPALAKVLK LRDGERFTLE TGVRDAIACD
PLRASPAHPD RFGPRWSILD ADAQWEVISR IRRVQSDAEH AALVDWLTEA HGLDRAHAEA
TAHAPLPDGY GRLGLTATTR ILYQLTADVV TYADAVKACG WHHSDGRTGE CFDRLPYYGE
VLERHVIPGS YHPDDDDITR FGRITNPTVH IGLNQLRRLV NRIIETHGKP HQIVVELARD
LKKSEEQKRA DIKRIRDTTE AAKKRSEKLE ELEIEDNGRN RMLLRLWEDL NPDDAMRRFC
PYTGTRISAA MIFDGSCDVD HILPYSRTLD DSFPNRTLCL REANRQKRNQ TPWQAWGDTP
HWHAIAANLK NLPENKRWRF APDAMTRFEG ENGFLDRALK DTQYLARISR SYLDTLFTKG
GHVWVVPGRF TEMLRRHWGL NSLLSDAGRG AVKAKNRTDH RHHAIDAAVI AATDPGLLNR
ISRAAGQGEA AGQSAELIAR DTPPPWEGFR DDLRVRLDRI IVSHRADHGR IDHAARKQGR
DSTAGQLHQE TAYSIVDDIH VASRTDLLSL KPAQLLDEPG RSGQVRDPQL RKALRVATGG
KTGKDFENAL RYFASKPGPY QAIRRVRIIK PLQAQARVPV PAQDPIKAYQ GGSNHLFEIW
RLPDGEIEAQ VITSFEAHTL EGEKRPHPAA KRLLRVHKGD MVALERDGRR VVGHVQKMDI
ANGLFIVPHN EANADTRNND KSDPFKWIQI GARPAIASGI RRVSVDEIGR LRDGGTRPI
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