| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0399 |
|---|
| Symbol | |
|---|
| ID | 5711315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 390817 |
|---|
| End bp | 391029 |
|---|
| Gene Length | 213 bp |
|---|
| Protein Length | 70 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641266304 |
|---|
| Product | DNA binding domain protein |
|---|
| Protein accession | YP_001531749 |
|---|
| Protein GI | 159042955 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.687205 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATT GGCCGTTTCC GCCCAACGCC CCGTACCTGA GCGTCAAGGA AGTCGCGCAG
GTTTTCCGGA TCTGCCCGAA GACCGTCCGG CGCTGGATCG CGTCCGGTCA GCTCCCGGCC
ACGCGGCTGG GACGCGACTG GCGCATTGCC AGATCAGACC TGAGGGCGCT TGCCGCTGCT
CGCGGAAAGA CGGGTCTGGC CGATGTCCTC TAA
|
|---|
| Protein sequence | MTDWPFPPNA PYLSVKEVAQ VFRICPKTVR RWIASGQLPA TRLGRDWRIA RSDLRALAAA
RGKTGLADVL
|
|---|
| |