| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0396 |
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| Symbol | |
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| ID | 5711312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 386137 |
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| End bp | 387813 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641266301 |
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| Product | recombinase |
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| Protein accession | YP_001531746 |
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| Protein GI | 159042952 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCCGT CTAGTGTACC AAACCGAAAG GCCCGACCCA TGCGCGCCGC CATTTACGCC
CGCTATTCCA CGGATCTCCA AAGCGACAGT TCCATAGAGG ATCAACATCG CCTCTGTGCC
CGTTTGATCA CCAGCAACGG CTGGAGGGAG GCCGAGACCT ATTCCGACCG GGGGCTCAGC
GGTGCGTCAC ATTTGCGCCC CGCCTACCAG CGTTTGCTGG AGGACGCGCG CGGCAACGCG
TTCGATATCG TGGTCGCGGA AGGGCTCGAC CGGATAAGCC GGGATCAGGA GCACATCGCG
GCCTTCTTCA AACAGATGCG GTTCCAGGGC ATTCCTGTGT TCACGGTGGC AGAGGGGGAG
ATCTCCGAGC TTCATATCGG CCTCAAGGGC ACCATGAGCA GCCTGTTTCT CAAGGATCTC
GCCCAGAAGA CGCACCGGGG TCTGGAAGGC AGAGTGCGCA AGGGCAAGTC GGCCGGAGGC
GTTACCTTTG GCTATGACGT CCTGCGTCAG ATGCAAGCCG ACGGGACCCT GGCCACCGGG
GAACGGGCCA TCAACCCGGA TCAGGCCGAG GTCGTGCGCA GGATTTTGGA AGACTACAAG
AATGGGCTCA GCCCGAGGGC GATCGCGAGC ACCTTGAACG CGGAAGGTGT CCCAGGCCCT
CGCGGGACAT GGGGGGCCTC GACGATCTAC GGCAACCACC AGCGCGGCAC CGGCATCCTG
AACAACGAAC TCTATATCGG ACGCCTCGTC TGGAACCGCC AACGCTTCAT CAAGGATCCA
GCGACCGGCA AACGCCAGGC CCGCCCAAAC CCGCCAGACG CGTGGGTAAT CGAAGACGTG
CCACACCTGC GGATCGTGGA CGAGGACCTT TGGGACGCCG TGAAGGCACG ACAGCTTCAA
ACCCGGAATA TGGCAATCAG TGACGGCATC AAGAAGCTCG GCCGGGCGAG GCGCGCCCGG
CATCTGTTTT CCGGGATGCT CAAGTGCGGC CGCTGCGGTG GTGGCTTTGT TCAGGTTGGA
AGCCAATTCT ATGGCTGCGC AAGTGTCCGC AACAAAGGCA CATGCGACAA CCGATTGACG
ATCAGACGAG AAGACTTGGA GGCCCGTATC CTCAGCGGGC TAAAGGAGCA GCTTTTGCAG
CCCGACCTTA TCGCGGAATA TGTCCGGGCC TACCAGGAAG AGTTCAATCG CCTTGCGGGG
ACGGTGCGCA AGGAGCGCGC CCAGAACGCG CGCAAACTCG CCGCCGTCAA TCGACAGATA
GACCAGATCG TCGATGCGAT TGCCCAGGGG ATGTTCCACA TCAGCATGAA GGACAAGATG
ACGGCGCTGG AGGCGGAGAA GCTGCGTCTT GAGCAGGAGT TGCGCGAGAC AGAAGAAGAG
TCACCGGTCC TTATTCATCC CGGTCTTGCG GATCGGTATC GCGCACAGGT CGAGAGCCTG
GAAGGGGCGC TGGCCGACCC GCAGAGATCA GTGGAAGCGG CGGATGCTAT CCGCAGCCTT
TTGTCGGAGA TCCGTCTTGT TCCGGAAGCG GATGGCTTGA CCATTGAGCT TGTTGGCGAA
CTTGCCGGAC TTTTGGGTCT TGGGGGGATC CAGAATGCGA ACGACCGCCC GAAGGCGGTC
TGTTCGACAT CAATGGTTGC GGGAGTAGGA TTTGAACCTA CGACCTTCAG GTTATGA
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| Protein sequence | MGPSSVPNRK ARPMRAAIYA RYSTDLQSDS SIEDQHRLCA RLITSNGWRE AETYSDRGLS
GASHLRPAYQ RLLEDARGNA FDIVVAEGLD RISRDQEHIA AFFKQMRFQG IPVFTVAEGE
ISELHIGLKG TMSSLFLKDL AQKTHRGLEG RVRKGKSAGG VTFGYDVLRQ MQADGTLATG
ERAINPDQAE VVRRILEDYK NGLSPRAIAS TLNAEGVPGP RGTWGASTIY GNHQRGTGIL
NNELYIGRLV WNRQRFIKDP ATGKRQARPN PPDAWVIEDV PHLRIVDEDL WDAVKARQLQ
TRNMAISDGI KKLGRARRAR HLFSGMLKCG RCGGGFVQVG SQFYGCASVR NKGTCDNRLT
IRREDLEARI LSGLKEQLLQ PDLIAEYVRA YQEEFNRLAG TVRKERAQNA RKLAAVNRQI
DQIVDAIAQG MFHISMKDKM TALEAEKLRL EQELRETEEE SPVLIHPGLA DRYRAQVESL
EGALADPQRS VEAADAIRSL LSEIRLVPEA DGLTIELVGE LAGLLGLGGI QNANDRPKAV
CSTSMVAGVG FEPTTFRL
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