| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0379 |
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| Symbol | livM |
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| ID | 5711288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 361062 |
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| End bp | 362138 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641266277 |
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| Product | high-affinity branched-chain amino acid transport system permease protein livM |
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| Protein accession | YP_001531729 |
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| Protein GI | 159042935 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.192974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTATC GTGAGGCCGG GGACTTCAAG ACGTCCTATG TCGCGGACAG CCAGACCTTC
CCCATCGCGT TCGACCGGAT GCGGTACTAC CTGGTTCTGG CCGTGGCGGT CGGGATCATT
CCCTTCGTGA TCAATGATTA CTGGGCCAGT GCCGTGATGG TGCCCTTCCT GATCTGGGCG
ATCGCGGCGA TCGGTCTGAA CATCCTGACC GGCTACTGCG GGCAGGTGAG CCTAGGCACG
GGCGGGTTCA TGGCCGTGGG GGCCTATGCC TGCTACAAGC TGATGACGGC GTTTCCGGAC
CTCAACATCG CGATCTGCGT GCTGCTGGGC GGGGTGATCA CCGCTGCCGT GGGCGTGTTG
TTCGGCCTGC CGTCCCTGCG GATCAAGGGG TTCTACCTGG CGGTGGCGAC CCTGGCGGCG
CAGTTCTTTC TGGTGTGGCT CTTCAACAAG GTGCCGTGGT TCTACAACTA CTCGGCCTCG
GGGCAGATCA ACGCGCCGGA GCGGACGATG TTCGGCTACG CGATCACCGG GCCGAACGCG
GATGCGGCGC CCAAATACCT GTTCTGCCTT GCGTTCCTGT TCGTACTCGC CTGGCTGGCA
CGGAACCTGA CGCGCGGGAC CATCGGGCGC AGCTGGATGG CGATCCGCGA CATGGATATC
GCCGCCGAGA TCATCGGTGT GAACCCGCTG AAGGCCAAGC TGACGGCGTT CGCGGTCAGT
TCGTTCTTCG TGGGCGTGGC GGGCGCGCTG TTTTTCAGCG TCTACCTGGG TGCGGTGGAG
GTCGGCGAGG CCTTCGGGAT CAACCAGTCC TTCCTGGTGC TGTTCATGAT CATCATCGGG
GGGCTCGGCT CGATCTTCGG CAGCCTTGCG GGCGCGGCCT TCATCGTGCT GCTGCCGGTG
CTGTTGAAGA ACGTGATGGT GGGTTCGCTG GGTTGGGACA CGGCGATTGC GGCGCATTTC
GAGTTCGTGG TGCTGGGCGG GCTGATCATC TTCTTTCTGA TCGTGGAGCC GCATGGATTG
GCGCGGCTCT GGCAGTTGGC GAAGGAAAAA CTGCGGCTGT GGCCGTTCCC GCATTGA
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| Protein sequence | MFYREAGDFK TSYVADSQTF PIAFDRMRYY LVLAVAVGII PFVINDYWAS AVMVPFLIWA
IAAIGLNILT GYCGQVSLGT GGFMAVGAYA CYKLMTAFPD LNIAICVLLG GVITAAVGVL
FGLPSLRIKG FYLAVATLAA QFFLVWLFNK VPWFYNYSAS GQINAPERTM FGYAITGPNA
DAAPKYLFCL AFLFVLAWLA RNLTRGTIGR SWMAIRDMDI AAEIIGVNPL KAKLTAFAVS
SFFVGVAGAL FFSVYLGAVE VGEAFGINQS FLVLFMIIIG GLGSIFGSLA GAAFIVLLPV
LLKNVMVGSL GWDTAIAAHF EFVVLGGLII FFLIVEPHGL ARLWQLAKEK LRLWPFPH
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