| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0376 |
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| Symbol | livH |
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| ID | 5711285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 359118 |
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| End bp | 360107 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641266274 |
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| Product | high-affinity branched-chain amino acid transport system permease protein livH |
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| Protein accession | YP_001531726 |
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| Protein GI | 159042932 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.262788 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGATC AACTGCTCTT CGCGATGGAG GTCACGCTCA ACGGGCTGAT GGCGGGGGTG
ATGTATGCGC TCGTGGCCCT GGGCTTCGTG TTGATCTTCA AGGCCTCCGG CATCTTCAAC
TACGCCCAGG GGGTCATGGC GCTCTTTGCG GCGATGACGC TGGTGGGGAT CCAGAACGGG
CAGGTGCCCT TCGCCCATCT GATCAACGCG ATTTTCGGCA CCAATATCCA CTATTTCGGC
TGGCAGGTGC CGGCGCTGCT GGCGATCCTG CTGACGGTTT TCGTGATGAT CGGCTTCGCC
TGGGCGGTGA ACCGCTTCGT GCTGCGCCAC CTGGTGAACC AGGAGCCGAT CATTCTGTTC
ATGGCGACCA TCGGGCTGGC CTATTTCCTG GAAGGGACCG CGGACCTGAT GTGGGGCGCG
GAGATCAAGA AGCTGGATGT GGGCCTGCCC CAGGGGCTCA ACGAGGCCAT CGACGAGACC
ACCTTCAACC TGTTCGGCTA CGGGTTCTTC ATCGACAACC TGGATATCTC GGCGGCGATC
ATCGCCACGG TGCTGGTCTC GGGGCTGGTG ATCTTCTCGC AATACACAAA ACAGGGCCGG
GCCCTGCGGG CGGTGGCCGA CGATCACCAG GCGGCCCTGT CGGTAGGCAT CAGCCTGAAT
TTCATCTGGG TGCTGGTTTG GTCCATCGCG GGCTTCGTGG CGCTGGTCGC AGGCATCATG
TGGGGCGCGA AATCGGGGGT GCAATTCTCG CTGTCGCTGA TCGCGCTGAA GGCTTTGCCG
GTGCTGATGC TGGGCGGGTT CACGTCGATC CCCGGGGCGA TCGTCGGCGG GCTGATCATC
GGGATGGGCG AGCAGCTTTT CGAGTTTCTG ATCGGGCAGC CCTACTTGGG CGGGGCCACG
CAGAACTGGT TCGCCTATGT GCTGGCCCTG GTGTTCCTCG TCTTCCGGCC CCAGGGGCTG
TTCGGCGAGA AGATCATCGA GAGGGTCTAG
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| Protein sequence | MPDQLLFAME VTLNGLMAGV MYALVALGFV LIFKASGIFN YAQGVMALFA AMTLVGIQNG
QVPFAHLINA IFGTNIHYFG WQVPALLAIL LTVFVMIGFA WAVNRFVLRH LVNQEPIILF
MATIGLAYFL EGTADLMWGA EIKKLDVGLP QGLNEAIDET TFNLFGYGFF IDNLDISAAI
IATVLVSGLV IFSQYTKQGR ALRAVADDHQ AALSVGISLN FIWVLVWSIA GFVALVAGIM
WGAKSGVQFS LSLIALKALP VLMLGGFTSI PGAIVGGLII GMGEQLFEFL IGQPYLGGAT
QNWFAYVLAL VFLVFRPQGL FGEKIIERV
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