| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0375 |
|---|
| Symbol | livG |
|---|
| ID | 5711284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 358153 |
|---|
| End bp | 358974 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641266273 |
|---|
| Product | high-affinity branched-chain amino acid transport ATP-binding protein livG |
|---|
| Protein accession | YP_001531725 |
|---|
| Protein GI | 159042931 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.529081 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACA TGTCCCATGA GGGCTACACC ACCGAGGACG GCCGCAAGAT CGGCGGGGTC
CTGATGGAGA TGCGCAATAT TACCCTGAAA TTCGGGGGGG TTACGGCGAT CAAGGACATC
TCCTTCGACA TCCGCGAGGG TGAGATCCGG GCGATCATCG GGCCGAACGG GGCGGGCAAG
TCCTCGATGC TGAACGTGAT CTCGGGGTTC TACGTGCCGC AGGAGGGGCA GGTGATGTTT
CGCGGGGCGC CGCGGCCGAA GATGAAGCCG TACCAGGTGG CGCGGCAGGG GATCGCGCGG
ACGTTTCAGA ACATCGCGCT GTTCGAGGGG ATGTCGGTGC TCGACAACAT CATGACCGGG
CGTCTGACCC ATATGAAATC GAACATGCTC GACCAGGCGA TCTGGTGGGG GAAAGCCCAG
AAAGAAGAGA CGGAAAACCG GGAAAAAGTG GAGAAAATCA TCGACTTCCT GGAGATCCAG
AACATCCGCA AGACGCCCGT TGGACGCCTG CCTTACGGGC TGAAGAAGCG GGTGGAGCTG
GCGCGCGCGC TGGCCGCGGA GCCCAAGCTG CTGCTGCTGG ACGAGCCGAT GGCGGGTATG
AATGTCGAGG AAAAAGAGGA TATGTCCCGC TATATCCTTG ATACCAATGA TGAATTCGGC
ACCACCATCG CCCTGATCGA GCACGATATG GGGGTGGTGA TGGACCTCAG CGACCGGGTC
GTGGTGATGG ATTACGGCAA GAAGATCGGG GACGGCACGC CGGACGAGGT GCGCAACAAC
CAGGACGTGA TCGACGCCTA TCTGGGGGTG GCCCATGACT GA
|
|---|
| Protein sequence | MNDMSHEGYT TEDGRKIGGV LMEMRNITLK FGGVTAIKDI SFDIREGEIR AIIGPNGAGK
SSMLNVISGF YVPQEGQVMF RGAPRPKMKP YQVARQGIAR TFQNIALFEG MSVLDNIMTG
RLTHMKSNML DQAIWWGKAQ KEETENREKV EKIIDFLEIQ NIRKTPVGRL PYGLKKRVEL
ARALAAEPKL LLLDEPMAGM NVEEKEDMSR YILDTNDEFG TTIALIEHDM GVVMDLSDRV
VVMDYGKKIG DGTPDEVRNN QDVIDAYLGV AHD
|
|---|
| |