Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0371 |
Symbol | |
ID | 5711280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 354573 |
End bp | 355304 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641266269 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001531721 |
Protein GI | 159042927 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGGAAC TGACGGGAAA ACGCTATTGG CTGGTCGGGG CAAGCGAGGG GCTCGGCCGG GCCCTGGCGG AGCATCTGAG CCGGATGGGC GTCGAACTGG TGCTTTCTGC ACGGTCCGAG GACCGGCTGA AGGAACTGGC CGAGAGCCTG CCGGGCAAGG CCCATGCGGT GCCGGTGGAT ATCTCGGACA CCGCCAGCGT GACCGCCGCC GCCGAGGCCG CGGGTCAGAT CGACGGCATG GTCTTTCTCG CCGGGGTCTA CTGGCCGCTG AAGGCGACCG AATGGGACGC CGAGAAGGTC GAGGCGATGT GCGACATCAA CTTCACCGGG GCGGCGCGCT GCGTCGGTGC GGTGCTGCCG GGCATGGTGG CGCGGGATGC GGGCCATATC GTGCTGACCG GGTCGCTGTC GGGGTTTCGC GGCCTGCCTG GGGCGTCGGG ATACGGTCCG TCCAAGGCGG GGGTGATGGC CATGGCCGAG GCCATGCATT GCGACCTGCG CAAGACCGGC GTCGATGTGC AGGTGGCCAA CCCGGGCTTC ATCCGGACCC GCCTGACCGA GAAGAACGAT TTCAACATGC CCTTCCTGAT GGAACCCGAG GACGCCGCCC GCGAGATGGT GGAACTGATG CTGACCGACA GCTTCAAGCG CAGCTTCCCC ACGGTCTTCG CCAGCTTCTT CCGGCTCAGC CAGTTCCTGC CCGACTGGGC CTATTACCGG ATCTTCGCCT GA
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Protein sequence | MRELTGKRYW LVGASEGLGR ALAEHLSRMG VELVLSARSE DRLKELAESL PGKAHAVPVD ISDTASVTAA AEAAGQIDGM VFLAGVYWPL KATEWDAEKV EAMCDINFTG AARCVGAVLP GMVARDAGHI VLTGSLSGFR GLPGASGYGP SKAGVMAMAE AMHCDLRKTG VDVQVANPGF IRTRLTEKND FNMPFLMEPE DAAREMVELM LTDSFKRSFP TVFASFFRLS QFLPDWAYYR IFA
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