Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0364 |
Symbol | rmuC |
ID | 5711273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 347936 |
End bp | 349168 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641266262 |
Product | protein of unknown function DUF195 |
Protein accession | YP_001531714 |
Protein GI | 159042920 |
COG category | [S] Function unknown |
COG ID | [COG1322] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.659068 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGAGA TCGCGGGCAG GGTCTGGAGC GAACAGGAAC TGGTGCTGGC CGGGGCGGCG GCGCTGGGCA TCGTGCTGCT GTCGATGCTG ATCCTGCTGG TGGTGGCGGT GCGGGCCGCC GGACGCTCGG CCCGGGCGAC CGAGCCGCTG GTGGTGCAGG TCGACACGTT GGGCCGCGCG GTCGAGGCGC TGGGCCAAGG GCAGCACGCG CTGTCGGGGG GGCTGAAATC GGTGTCGGAC GCCCAGGCCA CGGCGCAGAT GCACATGGTC CAGACCATGG AGGCCCGCCT GGCCCATGTG CAGCAGCAGA TGACCGAAAC GCTCCATGCC AATGCGTTGA AATCCGCGAA TGCCCTGTCG GAGATGCAGA CGCGGATGAA CGAGACCCTG TCGGGCAGTT CGGAGAAAAC CACGAAATCC CTGACCCAGT TGCAGGAGCG GCTGGCCACG ATCGACAAGG CCCAGACCAA TATCGAGAAG CTGTCGGGCG ATGTGCTGAG CCTGCAGGAT ATCCTGTCGA ACAAGCAGAC CCGCGGCGCG TTCGGGGAAA TCCAGCTCCA TGACATCGTG TCCAAGGCGC TGCCGGCGGA TGCCTATGCG ATGCAGGCGA CGCTGAGCAA CGGCAAGCGC GCGGATTGCC TGATCGGGCT GCCGAACCCG CCGGGCCCCA TCGTCATCGA CAGCAAGTTC CCGCTGGAGG CCTACGAGAA GCTGCGCGCC GCCGGCACCC CGGCGGAGCA GACGCTCGCC CTGCGGGAGA TGAAGGCCGC GGTGCGCACC CATATCAAGG CGATTGCCGA GCGCTACATC ATCGAAGGCG AGACCGCGGA CGGGGCGCTG ATGTTCCTGC CGTCCGAGGC GGTCTATGCG GAACTGCACG CCTCCCTGCC GGAGGTGGTG CGCGAGGGCT TCGCGGCCCG GGTCTGGATC GTGTCGCCCA CCACCTGCAT GGCGACGCTG AACACCATGC GCGCGGTGCT GAAGGATGCG CGGATGCGCG AGCAGGCGGG GGCGATCCGC AAGACCCTGG GAATGCTGCA CCGGGATGTG GAGATCGTGC TGGAGCGGGT GGCGAAGCTC GACACCCATT TCAACCAGGC GCGCCAGGAC CTCGACGGGA TCACCACGGC CGCCGAGCGC GCAGGCAAGC GCGCGGGGCG GCTGGAGAGC TTCGATTTCG ACGAACAGAA TGACGGACCG CAGCTGATCT CGGTGGCGGA TCCATCGCGC TGA
|
Protein sequence | MIEIAGRVWS EQELVLAGAA ALGIVLLSML ILLVVAVRAA GRSARATEPL VVQVDTLGRA VEALGQGQHA LSGGLKSVSD AQATAQMHMV QTMEARLAHV QQQMTETLHA NALKSANALS EMQTRMNETL SGSSEKTTKS LTQLQERLAT IDKAQTNIEK LSGDVLSLQD ILSNKQTRGA FGEIQLHDIV SKALPADAYA MQATLSNGKR ADCLIGLPNP PGPIVIDSKF PLEAYEKLRA AGTPAEQTLA LREMKAAVRT HIKAIAERYI IEGETADGAL MFLPSEAVYA ELHASLPEVV REGFAARVWI VSPTTCMATL NTMRAVLKDA RMREQAGAIR KTLGMLHRDV EIVLERVAKL DTHFNQARQD LDGITTAAER AGKRAGRLES FDFDEQNDGP QLISVADPSR
|
| |