| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0362 |
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| Symbol | pqqL1 |
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| ID | 5711271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 344721 |
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| End bp | 346034 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641266260 |
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| Product | peptidase M16 protein |
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| Protein accession | YP_001531712 |
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| Protein GI | 159042918 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0563461 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGTA TTCTGGGCGG GTTCGCCGCG CTGATCCTCT GGGCCGTTCC GGCCTGGGCA
ATCGTCGACA TCCAGGAGGT GACCTCCCCC GGCGGGATCG AGGCCTGGCT GGTGGAGGAT
CATTCGATCC CCTTCACCGC GCTGGAGATC CGGTTCGAGG GGGGGGCCGC CCTGGACCCC
GAGGGCAAGC GGGGGGCGGC CTATTTCATG AGCGGGCTGC TCGAAGAGGG CGCGGGGGAG
TATGACGCGC GCGGCTACGC GGCCCGGACC GAGGCGCTGG CGGCGAGTTT CGAGTTCGAC
ATCTCCGACG ACAGCCTGGC GATCTCGGCG CGGTTTCTGA CCGAGAACCG GGACGAGGCG
CTGGAGCATC TGCGCCTGGC CATCCAGGAG CCGCGTTTCG ACGACGAGGC GATCGAGCGG
GTGCGGGCGC AGATCCTGTC GGTCATCGCC TCGGACGCGC AGGACCCCAA CGCCATCGTC
GGCGCGCGGT TCGATGCGCT GGCCTTTCCC GATCACCCCT ATGGCACACC CTACGAGGGC
AGCGCCGAGA GTGTCGCGGG GCTGACCCGC GACGACCTGG TGGCGTCGCA CCGCGCGATT
CTCGCCCGCG ACCGGATCCA TGTCGGCGCG GCGGGCGATA TCACCGCCGA GGAGTTGGGC
GGTGTGCTCG ACGCGCTTCT GGGCGCGTTG CCGGAGACCG GCGCGCCCCT GCCCGAAGAC
ACCGAGGTCG CGCTGACCGG TGGGGTAACG GTGGTGCCCT TCGCCTCGCC GCAATCGGTG
GCGCGGTTCG GCCATGAGGG GCTGGCGCGG GACGACCCGG ACTTCTTCCC GGCCTTCATC
CTCAACCAGA TCGTCGGCGG GGGCGGGTTC AGTTCCCGCC TGATGCAGGA GGTGCGGGTG
GAGCGGGGCC TGACCTATGG CATCGGCTCC TACCTGCTGC CGCTGGACGA CGCGGCGCTC
TATATCGGGC AGTTCAGTTC CGACAACACC CGCATCGCCG AGGCCATTGC GGTGATCCGC
GAGCAATGGG CCGATATCGC CGCCAACGGG GTGACCGCGG AGGAGCTGGA CGAGGCGAAG
GTCTACCTGA CCGGGGCCTA TCCGCTGCGT TTCGACGGGA ACGGGCGGAT CGCCAGCATC
CTTGTCGGCA TGCAGCAGGA CGATCTGAGC ATCGACTACA TCCCCACGCG CAACGACAAG
GTGCGCGCGG TGACCCTGGA GGATATCGCC CGCGTGGCGG CGCGGCTGCT GCGGCCGGAG
GATCTGCGCT TCGTGGTGGT GGGGATGCCC GAGGGGCTGG AGGCCTCCAA CTAG
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| Protein sequence | MSRILGGFAA LILWAVPAWA IVDIQEVTSP GGIEAWLVED HSIPFTALEI RFEGGAALDP
EGKRGAAYFM SGLLEEGAGE YDARGYAART EALAASFEFD ISDDSLAISA RFLTENRDEA
LEHLRLAIQE PRFDDEAIER VRAQILSVIA SDAQDPNAIV GARFDALAFP DHPYGTPYEG
SAESVAGLTR DDLVASHRAI LARDRIHVGA AGDITAEELG GVLDALLGAL PETGAPLPED
TEVALTGGVT VVPFASPQSV ARFGHEGLAR DDPDFFPAFI LNQIVGGGGF SSRLMQEVRV
ERGLTYGIGS YLLPLDDAAL YIGQFSSDNT RIAEAIAVIR EQWADIAANG VTAEELDEAK
VYLTGAYPLR FDGNGRIASI LVGMQQDDLS IDYIPTRNDK VRAVTLEDIA RVAARLLRPE
DLRFVVVGMP EGLEASN
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