| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0358 |
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| Symbol | purH |
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| ID | 5711267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 340610 |
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| End bp | 342199 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641266256 |
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| Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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| Protein accession | YP_001531708 |
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| Protein GI | 159042914 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
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| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.278248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC TCGTGCCCCT GCGCCGCGCG CTGCTTTCCG TATCCGACAA GACCGGGCTT
GTGCCCCTGG GTCAGGCGCT GGCCGCGCGG GGGGTGGAGT TGCTGTCCAC CGGGGGGACG
GCGAAGGCCT TGCGCGAGGC CGGGCTGGAC GTGGTGGACG TGTCCGATGT AACGGGCTTT
CCCGAGATGA TGGACGGGCG GGTCAAGACC CTGCATCCCA AGGTCCATGG CGGGCTTCTG
GCGCTGCGCG ACAACGCGGC CCATGTCTCG GCGATGGAGC GGCACGGCAT CGGGGCGATC
GACCTTTTGG TGGTGAACCT CTACCCGTTC GAGGCCACCG TGGCGGCGGG CGCGGATTAC
GCGGCCTGCA TCGAGAATAT CGACATCGGC GGGCCGGCGA TGATCCGGGC GGCGGCGAAG
AATCACAGCT TCGTCACGGT GCTGACGGAT GTGGAGGATT ACGAGGCCCT GCTGGGGGAG
CTGGAGGCGC GGGAGGGGGC CACCGGCTAT CCGTTCCGGC AGAAGATGGC GCTCAATGCC
TATGCGCGCA CGGCGGCCTA CGACGCGGCG GTGTCGGGCT GGATGACCGA TGCGCTGGCC
GAGGTGGCGC CGCGGCGGCG GGCGGTGGCG GGCACGCTGG CGCAGACCCT GCGTTATGGC
GAGAACCCGC ACCAGGGGGC GGCGTTCTAC GTGGACGGCT CGGACCGGCC CGGGGTGGCG
ACGGCGGTGC AGCACCAGGG CAAGGAGCTG AGCTACAACA ACATCAACGA CACGGACGCG
GCCTTCGAGC TGGTGGCGGA GTTCGCGCCC GAGGACGGGC CGGCATGCGC GATCATCAAG
CACGCCAATC CCTGCGGCGT GGCGCGGGGT GCCACCCTGG CGGAGGCCTA TACCAAGGCG
TTCCAATGCG ACCAGACCTC GGCCTTCGGT GGAATCATCG CGTTGAACCG GCCACTGGAC
GGCCCCACGG CCGAGGCGAT TTCCGGCATC TTCACCGAGG TGGTGATCGC CCCGGGGGCC
GATGAGACGG CGCGCGCGGT CTTCGCCGCC AAGAAGAACC TGCGCCTGCT GACGACCGAG
GGCCTGCCGG ACCCCAAGGC CCCGGCGCTG ACCGTGCGGC AGGTGTCGGG CGGCTACCTG
GTGCAGGACA AGGACAACGG CAATATCGGC TGGGACGACC TGAAGGTGGT CACGAAGCGC
GCGCCGAGCG AGGCGGAGAT CGCGGACCTT CTGTTCGCGT GGAAGGTCGC CAAGCATGTG
AAATCCAACG CCATCGTCTA TGTCAAGGAC GGCGCCACCG TGGGTGTGGG CGCGGGCCAG
ATGAGCCGGG TGGACAGCGC CCGGATCGCC GCGCGCAAGT CCGCCGACAT GGCCGAGGCG
CTGGGCCTCG AGACGCCGCT GATCCAGGGC TCGGTCGTAG CGTCGGATGC GTTCTTTCCC
TTCCCTGACG GGCTCTTGAC GGCGGCCGAG GCCGGGGCCA CGGCGGTGAT CCAGCCGGGC
GGGTCGATGC GCGATGTCGA GGTGATCGCG GCGGCCGACG CGGCCGGGCT GGCCATGGTC
TTCACCGGCA TGCGCCATTT CCGGCACTGA
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| Protein sequence | MTDLVPLRRA LLSVSDKTGL VPLGQALAAR GVELLSTGGT AKALREAGLD VVDVSDVTGF
PEMMDGRVKT LHPKVHGGLL ALRDNAAHVS AMERHGIGAI DLLVVNLYPF EATVAAGADY
AACIENIDIG GPAMIRAAAK NHSFVTVLTD VEDYEALLGE LEAREGATGY PFRQKMALNA
YARTAAYDAA VSGWMTDALA EVAPRRRAVA GTLAQTLRYG ENPHQGAAFY VDGSDRPGVA
TAVQHQGKEL SYNNINDTDA AFELVAEFAP EDGPACAIIK HANPCGVARG ATLAEAYTKA
FQCDQTSAFG GIIALNRPLD GPTAEAISGI FTEVVIAPGA DETARAVFAA KKNLRLLTTE
GLPDPKAPAL TVRQVSGGYL VQDKDNGNIG WDDLKVVTKR APSEAEIADL LFAWKVAKHV
KSNAIVYVKD GATVGVGAGQ MSRVDSARIA ARKSADMAEA LGLETPLIQG SVVASDAFFP
FPDGLLTAAE AGATAVIQPG GSMRDVEVIA AADAAGLAMV FTGMRHFRH
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