| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0353 |
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| Symbol | ffh |
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| ID | 5711262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 335696 |
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| End bp | 337210 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641266251 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_001531703 |
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| Protein GI | 159042909 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAAA ATCTCTCCGA CCGCCTCTCC GGTGTCTTCG ACCGGCTGAC CAAGCAGGGC
GCGCTCTCCG AGGCCGATGT CGCCACCGCC CTGCGCGAGG TCCGCGTCGC CCTTCTGGAG
GCCGACGTCT CCCTGCCTGT GGCGCGCGAC TTCATCAAGG CGGTCCAGGA AAAGGCCACC
GGCCAGGCCG TCACCAAATC CGTCACCCCC GGCCAGCAGG TCGTCAAGAT CGTCCATGAC
GAGCTGGTCC ATGTCCTGCA GGGCGACGAA GACCCCGGTG CGCTGAAGAT CGACAACCCG
CCCGCGCCCA TCCTGATGGT CGGCCTGCAG GGCGGCGGCA AGACCACCAC CACCGCCAAG
ATCGCCAAGC GCCTCAAGGA GCGTGACGGC AAGAAGATCC TGATGGCCTC GCTCGACGTC
AACCGCCCCG CGGCCATGGA ACAACTCGCC ATCCTCGGCG CCCAGATCGG CGTCGACACC
CTGCCCATCG TCAAGGGCGA GGACCCGGTC GCCATCGCCA GGCGCGCGAA AACCCAGGCC
TCCCTGGGCG GCTACGACGT CTACATGCTC GACACCGCCG GGCGCCTGTC CATCGACGAA
GAGCTCATGG CCCAGGTCGA GGCCGTCCGC GATGTCGCAA ACCCGCGCGA GACGCTGCTG
GTGGTTGACG GGCTCACCGG CCAAGACGCG GTCACCACCG CCGAGAACTT CGACGACCGC
ATCGGCATCA CCGGCGTCGT GCTGACCCGG ATGGACGGCG ACGGGCGCGG CGGCGCGGCG
CTCTCGATGC GCGCGGTCAC CGGCCGCCCG ATCCGCTTCG TGGGCCTGGG CGAGAAGATG
GATGCGCTGG AGACCTTCGA GCCCGACCGC GTCGCCGGCC GCATCCTCGG GATGGGCGAC
ATCGTGGCGC TCGTAGAAAA GGCCCAGGAA ACCATCGAGG CCGAGCAGGC CGAGCGCATG
ATGAAGCGCT TCCAGAAGGG TCAGTTCAAC ATGAACGACC TGCGCGGCCA GCTCGAACAG
ATGGAAAAGA TGGGCGGGGT CGAAGGCCTG ATGGGCATGA TGCCCGGCAT GTCCAAGATG
AAGGGCAAGC TCGACGAGGC CGGGTTCGAC GACAAGGTCA TCCGCCGCCA GATCGCCCTG
ATCCAGTCCA TGACCAAGAA GGAACGCGCC AACCCGCAGA TCCTGCAGGC ATCGCGCAAG
AAGCGGATCG CCAAAGGCGC GGGGATGGAG GTCTCCGACC TCAACAAGCT GCTGAAAATG
CACCGCCAGA TGTCCGACGC CATGAAGAAA ATGGGCAAGA TGGGCAAGAA GGGGATGATG
AAATCCCTTG GCGGGATGCT CGGCGGCGGC AAGGGCGGCA TGCCTCCGGG GATGCCCGGC
GATCTCGCGG GCATGAACCC CGCCGACCTG GAAAAGGCCG CCAAGGCCAT GGGCAAGATG
CCCGGCGGCG GCCTGCCCGG CCTCGGCGGC GGCGCCCTGC CCCCCGGCCT GTCGGGCTTC
GGCAAGAAGA AGTAA
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| Protein sequence | MFENLSDRLS GVFDRLTKQG ALSEADVATA LREVRVALLE ADVSLPVARD FIKAVQEKAT
GQAVTKSVTP GQQVVKIVHD ELVHVLQGDE DPGALKIDNP PAPILMVGLQ GGGKTTTTAK
IAKRLKERDG KKILMASLDV NRPAAMEQLA ILGAQIGVDT LPIVKGEDPV AIARRAKTQA
SLGGYDVYML DTAGRLSIDE ELMAQVEAVR DVANPRETLL VVDGLTGQDA VTTAENFDDR
IGITGVVLTR MDGDGRGGAA LSMRAVTGRP IRFVGLGEKM DALETFEPDR VAGRILGMGD
IVALVEKAQE TIEAEQAERM MKRFQKGQFN MNDLRGQLEQ MEKMGGVEGL MGMMPGMSKM
KGKLDEAGFD DKVIRRQIAL IQSMTKKERA NPQILQASRK KRIAKGAGME VSDLNKLLKM
HRQMSDAMKK MGKMGKKGMM KSLGGMLGGG KGGMPPGMPG DLAGMNPADL EKAAKAMGKM
PGGGLPGLGG GALPPGLSGF GKKK
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